B9LI28 (B9LI28_CHLSY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NusG antitermination factor EMBL ACM53748.1

Gene names

Ordered Locus Names:

Chy400_2353

Organism

Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) [Complete proteome] [HAMAP] EMBL ACM53748.1

Taxonomic identifier

480224 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Chloroflexus

Protein attributes

Sequence length	187 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 Transcription regulation Transcription termination SAAS SAAS006645
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9LI28 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 9ACE7D96A17BC464	FASTA	187	21,773
	10 20 30 40 50 60 MSEEKEKEKE ADDRRWYVIH TYSGYENKVK KNLEHRIASM EMQDQIFRVI VPTEEEIEIK 70 80 90 100 110 120 NGQRRTVNKK IYPGYVLVQM RLTDDSWYVV RNTPGVTSFV GHGNKPTPLD DEEVKAILRQ 130 140 150 160 170 180 MEGETPKVRV SYQKGQAVKI IDGPFTDFEG IVDAIDHERG RVRVLVSFFG REAPVELDFL QVTRLVE

References

[1]

"Complete sequence of Chloroflexus sp. Y-400-fl." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Kiss H., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. , Ovchinnikova G., Bryant D.A., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29364 / DSM 637 / Y-400-fl.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001364 Genomic DNA. Translation: ACM53748.1.
RefSeq	YP_002570074.1. NC_012032.1.
3D structure databases
ProteinModelPortal	B9LI28.
ModBase	Search...
Protein-protein interaction databases
STRING	B9LI28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7402844.
GenomeReviews	Gene locus Chy400_2353 in contig CP001364_GR.
KEGG	chl:Chy400_2353.
PATRIC	21424335. VBIChlSp61043_2457.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	VASGCEK.
ProtClustDB	CLSK974688.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF00467. KOW. 1 hit. PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9LI28_CHLSY

Accession

Primary (citable) accession number: B9LI28

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)