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B9LHP4 (B9LHP4_CHLSY) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Chy400_0314
OrganismChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) [Complete proteome] [HAMAP] EMBL ACM51753.1
Taxonomic identifier480224 [NCBI]
Taxonomic lineageBacteriaChloroflexiChloroflexalesChloroflexaceaeChloroflexus

Protein attributes

Sequence length507 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

recombinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9LHP4 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 5AD7A7875B636793

FASTA50756,785
        10         20         30         40         50         60 
MHAVIYARVS TEEQGDNFSI PAQLAACREY AERNGLQVVA ECIDTMSGAR LDRPGLQQVR 

        70         80         90        100        110        120 
DLVSQQLVQA VIVYHQDRLS RNLAHFLYLR DEFQNARIAL HFTTLGQARD TPEDKLIQNM 

       130        140        150        160        170        180 
IGSFAEHERL RIIERTKQGR RARLLSGKPL GLGNHPAYGY HWHGTKHDRH LHINEAEAAI 

       190        200        210        220        230        240 
VRRIFAWALE GVPTQRIAKL LTDMGVTPRG RAGRPPRPEW DHTTVAGMLR NPVYKGQYYS 

       250        260        270        280        290        300 
AAHNLFVPVP AIVDAETWEA VQEQLTRNQA MAKRNAKRVY SLRGRIRCGI CGNRMSGNGA 

       310        320        330        340        350        360 
GTRASGKTYH YYMCHAAKGA LIASCNHGTS YRAERLEALV WQWVIETVLD ETRLVRAIEA 

       370        380        390        400        410        420 
ARANEAGQRE ALEHERAAYA RQIAEAGTRT ARLIELYTAG VCTLDEVAAT KKQYELQRQS 

       430        440        450        460        470        480 
AQRELDRIDA QLAALNSHHA NRDALLAMAR ALKAALQIEA TPEEQMKVYE ALDVQVVVRE 

       490        500 
NNIDVRAVLT GDAGTFLIAG EPISSTR 

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References

[1]"Complete sequence of Chloroflexus sp. Y-400-fl."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Kiss H., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ovchinnikova G., Bryant D.A., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29364 / DSM 637 / Y-400-fl.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001364 Genomic DNA. Translation: ACM51753.1.
RefSeqYP_002568078.1. NC_012032.1.

3D structure databases

ProteinModelPortalB9LHP4.
ModBaseSearch...

Protein-protein interaction databases

STRING480224.Chy400_0314.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM51753; ACM51753; Chy400_0314.
GeneID7403034.
KEGGchl:Chy400_0314.
PATRIC21420030. VBIChlSp61043_0334.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1961.
OMAEFERENI.
ProtClustDBCLSK2476624.

Enzyme and pathway databases

BioCycCSP480224:GHIY-317-MONOMER.

Family and domain databases

Gene3D3.40.50.1390. 1 hit.
InterProIPR011109. Recombinase.
IPR006118. Recombinase_CS.
IPR006119. Resolv_N.
IPR025827. Zn_ribbon_recom_dom.
[Graphical view]
PfamPF07508. Recombinase. 1 hit.
PF00239. Resolvase. 1 hit.
PF13408. Zn_ribbon_recom. 1 hit.
[Graphical view]
SMARTSM00857. Resolvase. 1 hit.
[Graphical view]
SUPFAMSSF53041. Resolv_N. 1 hit.
PROSITEPS00397. RECOMBINASES_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9LHP4_CHLSY
AccessionPrimary (citable) accession number: B9LHP4
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)