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B9LEH8 (B9LEH8_CHLSY) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.2.1.1 EMBL ACM55170.1
Gene names
Ordered Locus Names:Chy400_3804 EMBL ACM55170.1
OrganismChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) [Complete proteome] [HAMAP] EMBL ACM55170.1
Taxonomic identifier480224 [NCBI]
Taxonomic lineageBacteriaChloroflexiChloroflexalesChloroflexaceaeChloroflexus

Protein attributes

Sequence length597 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3838 Potential EMBL ACM55170.1
Chain39 – 597559 Potential EMBL ACM55170.1
PRO_5000435348

Sequences

Sequence LengthMass (Da)Tools
B9LEH8 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 61D00CD5A01F6B19

FASTA59765,644
        10         20         30         40         50         60 
MPGTRFPSLR RLVLVVALLM VVSSLPFGPV HHSTARAQTS SPRTVFVHLF EWKWTDIAQE 

        70         80         90        100        110        120 
CENFLGPRGF AAVQVSPPQE HAIVAGYPWW QRYQPVSYQL TSRSGTRAEF ANMVARCKAV 

       130        140        150        160        170        180 
GVDIYVDAVI NHMTGVGSGV GSAGSTYSPY NYPGIYQYQD FHHCGRNGND DIQNYGDRYE 

       190        200        210        220        230        240 
VQNCELVNLA DLDTGSSYVR DRLAAYLNDL ISLGVAGFRI DAAKHIAAGD IAAILSRVNG 

       250        260        270        280        290        300 
SPYIYQEVIG AAGEPITPWE YTNNGDVTEF KYSNEIGRVF LNGKLAWLSQ FGEAWGMLPS 

       310        320        330        340        350        360 
DKAIVFVDNH DNQRGHGGGG TVVTYKNGVL YDLANVFMLA WPYGYPQVMS SYEFSNDFQG 

       370        380        390        400        410        420 
PPSDANGNTR SVYVNGQPNC FGEWKCEHRW RPIANMVAFR NATASTFSVS DWWSNGNNQI 

       430        440        450        460        470        480 
AFGRGDKGFV VINREDTTLN RTFQTSMAPG VYCNVIVADF TNGTCSGQTV TVDSNRRITV 

       490        500        510        520        530        540 
SIPPFSALAI HVGAKLSTQP ATVAVTFNVN ATTYWGQNVF VVGNIPQLGN WNPAQAVPLS 

       550        560        570        580        590 
AATYPVWSGT VNLPANTTIE YKYIKRDGSN VVWECCNNRV ITTPGSGSMT LNETWRP 

« Hide

References

[1]"Complete sequence of Chloroflexus sp. Y-400-fl."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Kiss H., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ovchinnikova G., Bryant D.A., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29364 / DSM 637 / Y-400-fl.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001364 Genomic DNA. Translation: ACM55170.1.
RefSeqYP_002571496.1. NC_012032.1.

3D structure databases

ProteinModelPortalB9LEH8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING480224.Chy400_3804.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM55170; ACM55170; Chy400_3804.
GeneID7403671.
KEGGchl:Chy400_3804.
PATRIC21427449. VBIChlSp61043_3991.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000253313.
KOK01176.
OMADSTCGND.
OrthoDBEOG6RZB1B.
ProtClustDBCLSK983880.

Enzyme and pathway databases

BioCycCSP480224:GHIY-3856-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9LEH8_CHLSY
AccessionPrimary (citable) accession number: B9LEH8
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)