B9LCG3 (RPIA_CHLSY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	Chy400_3453

Organism

Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) [Complete proteome] [HAMAP]

Taxonomic identifier

480224 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Chloroflexus

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 239	239	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000194696

Sequences

	Sequence		Length	Mass (Da)
	B9LCG3 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 8A50CABD0A4FCE34	FASTA	239	24,996
	10 20 30 40 50 60 MNTTSTETRK AMAAAAAVAL VRPGMVIGLG FGSTAAYATR MIAERLHQGD LNDIVGVPCA 70 80 90 100 110 120 EGTAQLAREL GIPLTTLDEV AAVDLTIDGA DEVDPQLSLI KGGGGALLRE KMVAQASRRV 130 140 150 160 170 180 AIIVDDSKLS PALGTRFALP LEVVDFGWRA TARWLEAQGG TVQLRLRADG QPFRTDQGNL 190 200 210 220 230 ILDWKCGPLN DPAALAAQLS ARAGIVEHGL FIGLATDLFV AGPDGVQHVT TSDCGTIAW

References

[1]

"Complete sequence of Chloroflexus sp. Y-400-fl." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Kiss H., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. , Ovchinnikova G., Bryant D.A., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29364 / DSM 637 / Y-400-fl.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001364 Genomic DNA. Translation: ACM54828.1.
RefSeq	YP_002571154.1. NC_012032.1.
3D structure databases
ProteinModelPortal	B9LCG3.
ModBase	Search...
Protein-protein interaction databases
STRING	B9LCG3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7404935.
GenomeReviews	Gene locus Chy400_3453 in contig CP001364_GR.
KEGG	chl:Chy400_3453.
PATRIC	21426712. VBIChlSp61043_3627.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	GGDPEYR.
ProtClustDB	CLSK954875.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_CHLSY

Accession

Primary (citable) accession number: B9LCG3

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	March 24, 2009
Last modified:	January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program