B9L312 (B9L312_THERP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-methylcitrate dehydratase EMBL ACM06892.1
EC=4.2.1.79 EMBL ACM06892.1

Gene names

Name:	prpD EMBL ACM06892.1
Ordered Locus Names:	trd_A0176

Encoded on

Plasmid Tros

Organism

Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) [Complete proteome] [HAMAP]

Taxonomic identifier

309801 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Thermomicrobiales › Thermomicrobiaceae › Thermomicrobium

Protein attributes

Sequence length	481 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACM06892.1
Technical term	Complete proteome Plasmid EMBL ACM06892.1
Gene Ontology (GO)
Biological process	propionate catabolic process, 2-methylcitrate cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro 2-methylcitrate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9L312 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 048F2DFDB46F0AA3	FASTA	481	52,506
	10 20 30 40 50 60 MGETGSGARP APDAVLVEIA RYVLETEIAS PVAAEAARLA LADSLACACE ALVHPDCTEL 70 80 90 100 110 120 IGPVAPGTIV PGGVRVPGTS LVLDPVGGAF AISALIRWLD YNDTWLAKEW GHPSDNFGAI 130 140 150 160 170 180 LAVADYVSRQ RRARGEQPYR VRDVLTAAIK AYEIQGVLAL ENSLNRVGFD HVQFVKVASA 190 200 210 220 230 240 AVAAALWGGG FAEVVSAVSN AWVDGPALRT YRHFPNTGPR KSWAAADATS RAVRLAWLAL 250 260 270 280 290 300 RGEPGYPTAL SAPQWGFQDV VLRGQPVVLA RPLGSYVMEN VLFKIAFPAE FHGQTAVEAA 310 320 330 340 350 360 LRLHPLVRDR LEEIAEIVIE TQESAKRIID KPGPFANPAD RDHSLQYMTA VALLYGELRY 370 380 390 400 410 420 EHYLEPIASD PRIPALIAKM RVIENPEFSR DYLDPEKRSI ANAVQVVFRD GSRTERVLVE 430 440 450 460 470 480 YPIGHPRRRA EGLPLLRQKL ARALRLVYPE RRAAALEHLL LDDPGLPDLA VDQLLDALHR G

References

[1]

"Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum." Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A. PLoS ONE 4:E4207-E4207(2009) [PubMed: 19148287] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001276 Genomic DNA. Translation: ACM06892.1.
RefSeq	YP_002523458.1. NC_011961.1.
3D structure databases
ProteinModelPortal	B9L312.
ModBase	Search...
Protein-protein interaction databases
STRING	B9L312.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7356899.
GenomeReviews	Gene locus trd_A0176 in contig CP001276_GR.
KEGG	tro:trd_A0176.
PATRIC	23915453. VBITheRos91376_2067.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	CLMDTLG.
ProtClustDB	PRK09425.
Family and domain databases
InterPro	IPR012705. 2Me_IsoCit_deHydtase_PrpD. IPR005656. MmgE_PrpD. [Graphical view]
KO	K01720.
PANTHER	PTHR16943. MmgE_PrpD. 1 hit.
Pfam	PF03972. MmgE_PrpD. 1 hit. [Graphical view]
SUPFAM	SSF103378. MmgE_PrpD. 1 hit.
TIGRFAMs	TIGR02330. PrpD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9L312_THERP

Accession

Primary (citable) accession number: B9L312

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)