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B9L231

- B9L231_THERP

UniProt

B9L231 - B9L231_THERP

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Protein
Submitted name: Alpha amylase, catalytic subdomain
Gene
trd_1931
Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTROS309801:GI0S-1918-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic subdomainImported
Gene namesi
Ordered Locus Names:trd_1931Imported
OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
Taxonomic identifieri309801 [NCBI]
Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
ProteomesiUP000000447: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309801.trd_1931.

Structurei

3D structure databases

ProteinModelPortaliB9L231.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiRTFEDET.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

B9L231-1 [UniParc]FASTAAdd to Basket

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MAVRLTERRR PAPVTQLADD PLWYKDAIIY ELHVRAFFDS NGDGIGDFPG     50
LTQKLDYLED LGITAVWLLP FYPSPLRDDG YDIADYTDVH PSYGTLRDVK 100
EFIREAHRRG IRVITELVLN HTSDQHPWFQ RARRAAPGSV WRNFYVWSDT 150
PEKYKEARII FKDFETSNWA WDPVAKAYYW HRFYAHQPDL NYDNPAVRRA 200
ILRVVDFWMR LGVDGMRLDA VPYLYEREGT NCENLPETHQ FLKELRRYID 250
ERYPNRMLLA EANQWPEDAV AYFGNGDECH MAFHFPLMPR LFMAIRMEDR 300
FPIVDILSQT PPIPETAQWA LFLRNHDELT LEMVTDEERD YMYRVYARDP 350
VARINLGIRR RLAPLLGNNR RRIELMNGLL FSLPGTPVIY YGDEIGMGDN 400
IYLGDRNGVR TPMQWSADRN AGFSTAPRQR LYLPVIVDAE YHYEAVNVAA 450
QQANPHSLLW WMKRLIGLRK QFKAFGRGSF EFIPVENRKV LAYVRRYEQE 500
TILVVANLSR FVQWAELDLS AYRGLVPVEL FGRIEFPLIG DGPYRVMLGP 550
HSFYWFSLER PRAGEEPVEI TTSELPLVPV RESEGTLELG SGQRAFEEIL 600
PRYLRKRRWF AGKARRIKQV RISEQVPLVT GESPATLVLV TVEYTEGDPE 650
QYVLPLALAR GERASEIVER TPHAVIARAL VEGSEALLVD ALAEPACVRS 700
LIEQIGRRRR FRGEHGVIAS QPTAAFRRLV RPDAPLPEPV LSRAEQSNTT 750
VIFPDRVLFK LYRRVEPGPN PELEMERVLS ERLGFPHVPP LAGSLEYQPA 800
HGEPMTLGIV LGYVPNEGDA WQYTLDELAG FLERALAYSE DPPSLRLEVE 850
SLLDLAGQTP PTMVYELIDT YVEAVRLLGQ RTGELHRALA SVTDDPAFAP 900
EPFSMLYQRS LYQAMRSHLL QTLALLRQQL ASLPVSTREQ ADAVLQRERE 950
IVQVYQKLLQ KLLPAQRTRC HGDYHLGQVL YTGRDFVIID FEGEPARPLS 1000
ERRLKRSPLL DVAGMLRSFH YAASATLLEQ QQRGLLSDLA RAEAWLRFWY 1050
GWVSAVFLQG YLEVVGSTAL VPSDSKDLGT LLEAYLMDKA IYEIRYELGH 1100
RPDWLAIPLG GVLELLRARE GSA 1123
Length:1,123
Mass (Da):129,063
Last modified:March 24, 2009 - v1
Checksum:i536AF6DAFC143B94
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001275 Genomic DNA. Translation: ACM05896.1.
RefSeqiYP_002523130.1. NC_011959.1.

Genome annotation databases

EnsemblBacteriaiACM05896; ACM05896; trd_1931.
GeneIDi7355271.
KEGGitro:trd_1931.
PATRICi23915024. VBITheRos91376_1853.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001275 Genomic DNA. Translation: ACM05896.1 .
RefSeqi YP_002523130.1. NC_011959.1.

3D structure databases

ProteinModelPortali B9L231.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 309801.trd_1931.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM05896 ; ACM05896 ; trd_1931 .
GeneIDi 7355271.
KEGGi tro:trd_1931.
PATRICi 23915024. VBITheRos91376_1853.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000268420.
KOi K05343.
OMAi RTFEDET.
OrthoDBi EOG6RVFV2.

Enzyme and pathway databases

BioCyci TROS309801:GI0S-1918-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
    Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
    PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27502 / DSM 5159 / P-2.

Entry informationi

Entry nameiB9L231_THERP
AccessioniPrimary (citable) accession number: B9L231
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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