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B9L231

- B9L231_THERP

UniProt

B9L231 - B9L231_THERP

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Protein
Submitted name:

Alpha amylase, catalytic subdomain

Gene

trd_1931

Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTROS309801:GI0S-1918-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic subdomainImported
Gene namesi
Ordered Locus Names:trd_1931Imported
OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
Taxonomic identifieri309801 [NCBI]
Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
ProteomesiUP000000447: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309801.trd_1931.

Structurei

3D structure databases

ProteinModelPortaliB9L231.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiRTFEDET.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

B9L231-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVRLTERRR PAPVTQLADD PLWYKDAIIY ELHVRAFFDS NGDGIGDFPG
60 70 80 90 100
LTQKLDYLED LGITAVWLLP FYPSPLRDDG YDIADYTDVH PSYGTLRDVK
110 120 130 140 150
EFIREAHRRG IRVITELVLN HTSDQHPWFQ RARRAAPGSV WRNFYVWSDT
160 170 180 190 200
PEKYKEARII FKDFETSNWA WDPVAKAYYW HRFYAHQPDL NYDNPAVRRA
210 220 230 240 250
ILRVVDFWMR LGVDGMRLDA VPYLYEREGT NCENLPETHQ FLKELRRYID
260 270 280 290 300
ERYPNRMLLA EANQWPEDAV AYFGNGDECH MAFHFPLMPR LFMAIRMEDR
310 320 330 340 350
FPIVDILSQT PPIPETAQWA LFLRNHDELT LEMVTDEERD YMYRVYARDP
360 370 380 390 400
VARINLGIRR RLAPLLGNNR RRIELMNGLL FSLPGTPVIY YGDEIGMGDN
410 420 430 440 450
IYLGDRNGVR TPMQWSADRN AGFSTAPRQR LYLPVIVDAE YHYEAVNVAA
460 470 480 490 500
QQANPHSLLW WMKRLIGLRK QFKAFGRGSF EFIPVENRKV LAYVRRYEQE
510 520 530 540 550
TILVVANLSR FVQWAELDLS AYRGLVPVEL FGRIEFPLIG DGPYRVMLGP
560 570 580 590 600
HSFYWFSLER PRAGEEPVEI TTSELPLVPV RESEGTLELG SGQRAFEEIL
610 620 630 640 650
PRYLRKRRWF AGKARRIKQV RISEQVPLVT GESPATLVLV TVEYTEGDPE
660 670 680 690 700
QYVLPLALAR GERASEIVER TPHAVIARAL VEGSEALLVD ALAEPACVRS
710 720 730 740 750
LIEQIGRRRR FRGEHGVIAS QPTAAFRRLV RPDAPLPEPV LSRAEQSNTT
760 770 780 790 800
VIFPDRVLFK LYRRVEPGPN PELEMERVLS ERLGFPHVPP LAGSLEYQPA
810 820 830 840 850
HGEPMTLGIV LGYVPNEGDA WQYTLDELAG FLERALAYSE DPPSLRLEVE
860 870 880 890 900
SLLDLAGQTP PTMVYELIDT YVEAVRLLGQ RTGELHRALA SVTDDPAFAP
910 920 930 940 950
EPFSMLYQRS LYQAMRSHLL QTLALLRQQL ASLPVSTREQ ADAVLQRERE
960 970 980 990 1000
IVQVYQKLLQ KLLPAQRTRC HGDYHLGQVL YTGRDFVIID FEGEPARPLS
1010 1020 1030 1040 1050
ERRLKRSPLL DVAGMLRSFH YAASATLLEQ QQRGLLSDLA RAEAWLRFWY
1060 1070 1080 1090 1100
GWVSAVFLQG YLEVVGSTAL VPSDSKDLGT LLEAYLMDKA IYEIRYELGH
1110 1120
RPDWLAIPLG GVLELLRARE GSA
Length:1,123
Mass (Da):129,063
Last modified:March 24, 2009 - v1
Checksum:i536AF6DAFC143B94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001275 Genomic DNA. Translation: ACM05896.1.
RefSeqiWP_015922873.1. NC_011959.1.
YP_002523130.1. NC_011959.1.

Genome annotation databases

EnsemblBacteriaiACM05896; ACM05896; trd_1931.
GeneIDi7355271.
KEGGitro:trd_1931.
PATRICi23915024. VBITheRos91376_1853.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001275 Genomic DNA. Translation: ACM05896.1 .
RefSeqi WP_015922873.1. NC_011959.1.
YP_002523130.1. NC_011959.1.

3D structure databases

ProteinModelPortali B9L231.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 309801.trd_1931.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM05896 ; ACM05896 ; trd_1931 .
GeneIDi 7355271.
KEGGi tro:trd_1931.
PATRICi 23915024. VBITheRos91376_1853.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000268420.
KOi K05343.
OMAi RTFEDET.
OrthoDBi EOG6RVFV2.

Enzyme and pathway databases

BioCyci TROS309801:GI0S-1918-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
    Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
    PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27502 / DSM 5159 / P-2Imported.

Entry informationi

Entry nameiB9L231_THERP
AccessioniPrimary (citable) accession number: B9L231
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: October 29, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3