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B9L231

- B9L231_THERP

UniProt

B9L231 - B9L231_THERP

Protein
Submitted name:

Alpha amylase, catalytic subdomain

Gene

trd_1931

Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. transferase activity, transferring phosphorus-containing groups Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciTROS309801:GI0S-1918-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase, catalytic subdomainImported
    Gene namesi
    Ordered Locus Names:trd_1931Imported
    OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
    Taxonomic identifieri309801 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
    ProteomesiUP000000447: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi309801.trd_1931.

    Structurei

    3D structure databases

    ProteinModelPortaliB9L231.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000268420.
    KOiK05343.
    OMAiRTFEDET.
    OrthoDBiEOG6RVFV2.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProiIPR002575. Aminoglycoside_PTrfase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR011009. Kinase-like_dom.
    IPR012810. TreS/a-amylase_N.
    IPR012811. TreS_maltokin_C_dom.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF01636. APH. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.
    SSF56112. SSF56112. 2 hits.
    TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
    TIGR02456. treS_nterm. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9L231-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVRLTERRR PAPVTQLADD PLWYKDAIIY ELHVRAFFDS NGDGIGDFPG     50
    LTQKLDYLED LGITAVWLLP FYPSPLRDDG YDIADYTDVH PSYGTLRDVK 100
    EFIREAHRRG IRVITELVLN HTSDQHPWFQ RARRAAPGSV WRNFYVWSDT 150
    PEKYKEARII FKDFETSNWA WDPVAKAYYW HRFYAHQPDL NYDNPAVRRA 200
    ILRVVDFWMR LGVDGMRLDA VPYLYEREGT NCENLPETHQ FLKELRRYID 250
    ERYPNRMLLA EANQWPEDAV AYFGNGDECH MAFHFPLMPR LFMAIRMEDR 300
    FPIVDILSQT PPIPETAQWA LFLRNHDELT LEMVTDEERD YMYRVYARDP 350
    VARINLGIRR RLAPLLGNNR RRIELMNGLL FSLPGTPVIY YGDEIGMGDN 400
    IYLGDRNGVR TPMQWSADRN AGFSTAPRQR LYLPVIVDAE YHYEAVNVAA 450
    QQANPHSLLW WMKRLIGLRK QFKAFGRGSF EFIPVENRKV LAYVRRYEQE 500
    TILVVANLSR FVQWAELDLS AYRGLVPVEL FGRIEFPLIG DGPYRVMLGP 550
    HSFYWFSLER PRAGEEPVEI TTSELPLVPV RESEGTLELG SGQRAFEEIL 600
    PRYLRKRRWF AGKARRIKQV RISEQVPLVT GESPATLVLV TVEYTEGDPE 650
    QYVLPLALAR GERASEIVER TPHAVIARAL VEGSEALLVD ALAEPACVRS 700
    LIEQIGRRRR FRGEHGVIAS QPTAAFRRLV RPDAPLPEPV LSRAEQSNTT 750
    VIFPDRVLFK LYRRVEPGPN PELEMERVLS ERLGFPHVPP LAGSLEYQPA 800
    HGEPMTLGIV LGYVPNEGDA WQYTLDELAG FLERALAYSE DPPSLRLEVE 850
    SLLDLAGQTP PTMVYELIDT YVEAVRLLGQ RTGELHRALA SVTDDPAFAP 900
    EPFSMLYQRS LYQAMRSHLL QTLALLRQQL ASLPVSTREQ ADAVLQRERE 950
    IVQVYQKLLQ KLLPAQRTRC HGDYHLGQVL YTGRDFVIID FEGEPARPLS 1000
    ERRLKRSPLL DVAGMLRSFH YAASATLLEQ QQRGLLSDLA RAEAWLRFWY 1050
    GWVSAVFLQG YLEVVGSTAL VPSDSKDLGT LLEAYLMDKA IYEIRYELGH 1100
    RPDWLAIPLG GVLELLRARE GSA 1123
    Length:1,123
    Mass (Da):129,063
    Last modified:March 24, 2009 - v1
    Checksum:i536AF6DAFC143B94
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001275 Genomic DNA. Translation: ACM05896.1.
    RefSeqiYP_002523130.1. NC_011959.1.

    Genome annotation databases

    EnsemblBacteriaiACM05896; ACM05896; trd_1931.
    GeneIDi7355271.
    KEGGitro:trd_1931.
    PATRICi23915024. VBITheRos91376_1853.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001275 Genomic DNA. Translation: ACM05896.1 .
    RefSeqi YP_002523130.1. NC_011959.1.

    3D structure databases

    ProteinModelPortali B9L231.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 309801.trd_1931.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM05896 ; ACM05896 ; trd_1931 .
    GeneIDi 7355271.
    KEGGi tro:trd_1931.
    PATRICi 23915024. VBITheRos91376_1853.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000268420.
    KOi K05343.
    OMAi RTFEDET.
    OrthoDBi EOG6RVFV2.

    Enzyme and pathway databases

    BioCyci TROS309801:GI0S-1918-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProi IPR002575. Aminoglycoside_PTrfase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR011009. Kinase-like_dom.
    IPR012810. TreS/a-amylase_N.
    IPR012811. TreS_maltokin_C_dom.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF01636. APH. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    SSF56112. SSF56112. 2 hits.
    TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
    TIGR02456. treS_nterm. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
      Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
      PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27502 / DSM 5159 / P-2Imported.

    Entry informationi

    Entry nameiB9L231_THERP
    AccessioniPrimary (citable) accession number: B9L231
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3