B9L1R5 (B9L1R5_THERP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
B12-dependent ribonucleoside diphosphate reductase EMBL ACM06017.1

Gene names

Ordered Locus Names:

trd_1815

Organism

Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) [Complete proteome] [HAMAP]

Taxonomic identifier

309801 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Thermomicrobiales › Thermomicrobiaceae › Thermomicrobium

Protein attributes

Sequence length	1122 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9L1R5 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 5E631A9AA151E7E6	FASTA	1,122	124,099
	10 20 30 40 50 60 MAAEHTNGQE QRGLKIRRFY TKAGQDPYET VKWTRRTSRI TNPDGTVIFE MTDAEVPEHW 70 80 90 100 110 120 SQVATDIVVS KYFRKAGVPQ LDEQGRPILD DQGNPVLGPE RSVRQVVRRL VGCWRDWGER 130 140 150 160 170 180 YGYFATAEDA QAFEDELAYM LLHQIGAPNS PQWFNTGLYW AYRIAGPPQG HWYVDPETGE 190 200 210 220 230 240 LRQSPDAYSH PSAHACFIQS VEDDLVNPGG IFDLVLREAR VFKYGAGSGT NFSKIRAEGE 250 260 270 280 290 300 PLSGGGTSSG LMSFLKVFDR AAGAIKSGGT TRRAAKMVVV DIDHPDIEKF IRWKAEEEKK 310 320 330 340 350 360 VAALVAAGYS ADFNGEAYAT VSGQNSNNSV RVPDEFIRAV LEDRDWHLRW RTDGRIAKTV 370 380 390 400 410 420 RARELWQMIA EAAWQCADPG IQYDTTINDW HTCPASGRIN ASNPCSEYMF LDDTACNLAS 430 440 450 460 470 480 LNLLKFYDAK SGRFDIAAFR HAVRLWTIVL EITVLMAQYP SREIAWNSYR FRTLGLGYAN 490 500 510 520 530 540 LGSLLMTMGL PYDSDRARAV AAAITAIMTG EAYATSAEMA AILGPFPAFP ENREHMLRVI 550 560 570 580 590 600 RNHRRAAYDA HPEEYEGLHI APQGLDATHC PPELVAAARE AWDRALELGE RFGYRNAQAT 610 620 630 640 650 660 LLAPTGTIGL LMDCDTTGIE PDFALVKFKK LAGGGYFKIV NRSVAPALER LGYTPEQIQD 670 680 690 700 710 720 ILTYVLGTLR LDGAPHINRE TLRARGLTED ELQRIEAALP SVFELRHAFS PHVIGEAALR 730 740 750 760 770 780 RLGFSPEQWS QPGFDLLAAL GFTAEEIEEA NDVICGRQTV EGAPHLAPEH LPVFDCANKC 790 800 810 820 830 840 GKHGTRFIHY MGHIRMMAAV QPFLSGAISK TINMPHEVTV EDVANAYFEG WRLGLKALAI 850 860 870 880 890 900 YRDGSKLSQP LSTRSSEKEK SERASTATRE APPPERQVEV MVVERPRRRP LPQKRRGFTY 910 920 930 940 950 960 EGRVGGQKVY LRTGEYEDGT LGEIFVDVAK EGAAFRSLMN CFAIAISKGL QYGVPLEEFV 970 980 990 1000 1010 1020 DTFTFQRFEP QGIVEGHPNI KMATSIIDYI FRVLGYEYLG RTDLVHVPPA DQSAASRDTG 1030 1040 1050 1060 1070 1080 ASAPAVQPEI DREANETSDQ PAPRAPSPKP RVDGQAELAA ALATVAAAVN GTVRAGSLRD 1090 1100 1110 1120 ALDEQLSQLM GDAPFCDVCG HLTVRNGSCY KCLNCGNSLG CS

References

[1]

"Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum." Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A. PLoS ONE 4:E4207-E4207(2009) [PubMed: 19148287] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001275 Genomic DNA. Translation: ACM06017.1.
RefSeq	YP_002523014.1. NC_011959.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B9L1R5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7356096.
GenomeReviews	Gene locus trd_1815 in contig CP001275_GR.
KEGG	tro:trd_1815.
PATRIC	23914786. VBITheRos91376_1734.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	FLWRSVP.
ProtClustDB	CLSK2808191.
Family and domain databases
InterPro	IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 2 hits. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9L1R5_THERP

Accession

Primary (citable) accession number: B9L1R5

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)