B9L042 (B9L042_THERP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
UPF0102 protein trd_1046 HAMAP MF_00048

Gene names

Ordered Locus Names:

trd_1046

Organism

Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) [Complete proteome] [HAMAP]

Taxonomic identifier

309801 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Thermomicrobiales › Thermomicrobiaceae › Thermomicrobium

Protein attributes

Sequence length	125 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0102 family. HAMAP MF_00048

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nuclease activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9L042 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 6D0F7A70DEFBBF17	FASTA	125	13,771
	10 20 30 40 50 60 MGRQCLGEAG ERAAARWLEE AGWHVLARNW RCRQGELDIV ALDGDVLVAV EVKVRRDAGN 70 80 90 100 110 120 EPAEWAVTPR KGRRLLAALS AFLAAHPEHQ ERLCRVDLIA VTVDRGGRIV RWSHLLGCVS EGDGA

References

[1]

"Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum." Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A. PLoS ONE 4:E4207-E4207(2009) [PubMed: 19148287] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001275 Genomic DNA. Translation: ACM04908.1.
RefSeq	YP_002522256.1. NC_011959.1.
3D structure databases
ProteinModelPortal	B9L042.
ModBase	Search...
Protein-protein interaction databases
STRING	B9L042.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7355910.
GenomeReviews	Gene locus trd_1046 in contig CP001275_GR.
KEGG	tro:trd_1046.
PATRIC	23913264. VBITheRos91376_0983.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	ICRFDVA.
ProtClustDB	CLSK2807823.
Family and domain databases
HAMAP	MF_00048. UPF0102. [Tree]
InterPro	IPR011856. Endonuc_TnsA/Hjc/tRNA. IPR011335. Restrct_endonuc_II-like. IPR003509. UPF0102. [Graphical view]
Gene3D	G3DSA:3.40.1350.10. Endonuc_TnsA/Hjc/tRNA. 1 hit.
KO	K07460.
Pfam	PF02021. UPF0102. 1 hit. [Graphical view]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit.
TIGRFAMs	TIGR00252. TIGR00252. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9L042_THERP

Accession

Primary (citable) accession number: B9L042

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)