Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

UDP-glucuronate decarboxylase

Gene

trd_0840

Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. coenzyme binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTROS309801:GI0S-833-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
UDP-glucuronate decarboxylaseImported
Gene namesi
Ordered Locus Names:trd_0840Imported
OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
Taxonomic identifieri309801 [NCBI]
Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
ProteomesiUP000000447: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309801.trd_0840.

Structurei

3D structure databases

ProteinModelPortaliB9KZC6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0451.
HOGENOMiHOG000168004.
KOiK01710.
OMAiTGTNQKV.
OrthoDBiEOG6ZPSWG.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR001509. Epimerase_deHydtase_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF01370. Epimerase. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9KZC6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRILVTGGAG FIGSHLCESL LLDGYQVIAV DSLLTGRLGN IRHLLTHPFF
60 70 80 90 100
RFIEQDVTQG IDIEADAIFH LASPASPVGY RQYPIETLLV NSVGTYHLLE
110 120 130 140 150
LARRVRARFV FASTSEVYGD PLIHPQREDY FGNVNPIGPR SCYDEGKRFG
160 170 180 190 200
EALTMEFVRS FGVDARIARI FNTYGPRMDP ADGRVVPNFI VHALTGEPIE
210 220 230 240 250
IFGDGMQTRS LCYISDMVRG LRLLMERDGL AGTVINLGNP DERTILELAY
260 270 280 290 300
LVRELTGNPV PIVFRPARPD DPGRRCPDIS RARAVLGWEP RVPVEEGLRM
310
TIDYFQDVLA RAAAFDE
Length:317
Mass (Da):35,408
Last modified:March 24, 2009 - v1
Checksum:iECC87C35A28B0141
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001275 Genomic DNA. Translation: ACM06334.1.
RefSeqiWP_012642225.1. NC_011959.1.
YP_002522068.1. NC_011959.1.

Genome annotation databases

EnsemblBacteriaiACM06334; ACM06334; trd_0840.
GeneIDi7356033.
KEGGitro:trd_0840.
PATRICi23912864. VBITheRos91376_0800.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001275 Genomic DNA. Translation: ACM06334.1.
RefSeqiWP_012642225.1. NC_011959.1.
YP_002522068.1. NC_011959.1.

3D structure databases

ProteinModelPortaliB9KZC6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi309801.trd_0840.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACM06334; ACM06334; trd_0840.
GeneIDi7356033.
KEGGitro:trd_0840.
PATRICi23912864. VBITheRos91376_0800.

Phylogenomic databases

eggNOGiCOG0451.
HOGENOMiHOG000168004.
KOiK01710.
OMAiTGTNQKV.
OrthoDBiEOG6ZPSWG.

Enzyme and pathway databases

BioCyciTROS309801:GI0S-833-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR001509. Epimerase_deHydtase_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF01370. Epimerase. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
    Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
    PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27502 / DSM 5159 / P-2Imported.

Entry informationi

Entry nameiB9KZC6_THERP
AccessioniPrimary (citable) accession number: B9KZC6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 4, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.