SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B9KXM0

- B9KXM0_THERP

UniProt

B9KXM0 - B9KXM0_THERP

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: DNA polymerase III, epsilon subunit
Gene
trd_0207
Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).SAAS annotations

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
  3. exonuclease activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseSAAS annotations, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationSAAS annotations

Enzyme and pathway databases

BioCyciTROS309801:GI0S-205-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, epsilon subunitImported
Gene namesi
Ordered Locus Names:trd_0207Imported
OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
Taxonomic identifieri309801 [NCBI]
Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
ProteomesiUP000000447: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309801.trd_0207.

Structurei

3D structure databases

ProteinModelPortaliB9KXM0.

Family & Domainsi

Sequence similaritiesi

Contains UVR domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG0322.
HOGENOMiHOG000091770.
KOiK02342.
OMAiYTRKMDG.
OrthoDBiEOG6PKFH3.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
IPR001943. UVR_dom.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
PF02151. UVR. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMiSSF46600. SSF46600. 1 hit.
SSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9KXM0-1 [UniParc]FASTAAdd to Basket

« Hide

MSDQPVEPAY DRLRSRARQL LLARGGIASE EQLIEGLFGS LGNRRLWAPF    50
LAQLLETDAE IVRRPDGTWA LRRRPLVPSR GWPRSFVALD VETTGLRPAR 100
HRIIEIGAVR YEDGCCVERF SVLVNPHRRL PVYIVRLTGI RDEDLLTAPS 150
FVDVAAAFRV FLGESTVIGY NVGFDLDFLN AELRRIGQGP LPNPALDVLP 200
LARALLTANG RYDLDAICRS IGLARGTRHR ALPDAEATAV LYLHLVERAE 250
QVGYRSPSDL QPAATRRTIV VEPVARGRAV LDQRLLADTP ELPGVYLMRD 300
ALGRVLYVGK ARNLRQRVRS YFSQPLGYTR KMDGLLESVA EIETVVTGSE 350
LEALLLESQF VQRYKPPYNT QLRNHEAYPY VKVELGRPWP RLMLARQRDD 400
DDAVYVGPFR STAAARSVVE LLHQLLPLRT CHRSFRDARS YGRPCLQLTL 450
GRCIGPCTGC VTPDEYRALV DCALRYLSGE TSVVVERAQQ LLADAVERLD 500
FERAARLRDL LRRSEELVFS HRLVRQTISG RPCVIVTPCP ETGDRAFLLI 550
VAGRLWARVV ADPREHDAAV AARLGAAWER AQQAAPWTLD QDSLDAAVII 600
ARWLSEHAED PTVFFLEHPV DWLALVRNGR SLPASAFAVH APVDDENGTT 650
KRTRGADSER GTQCEGTPGK HRRARPSLHA LRSMADPHSG GAR 693
Length:693
Mass (Da):77,438
Last modified:March 24, 2009 - v1
Checksum:iE8D4DB9040100EE8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001275 Genomic DNA. Translation: ACM05471.1.
RefSeqiYP_002521462.1. NC_011959.1.

Genome annotation databases

EnsemblBacteriaiACM05471; ACM05471; trd_0207.
GeneIDi7355256.
KEGGitro:trd_0207.
PATRICi23911636. VBITheRos91376_0206.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001275 Genomic DNA. Translation: ACM05471.1 .
RefSeqi YP_002521462.1. NC_011959.1.

3D structure databases

ProteinModelPortali B9KXM0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 309801.trd_0207.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM05471 ; ACM05471 ; trd_0207 .
GeneIDi 7355256.
KEGGi tro:trd_0207.
PATRICi 23911636. VBITheRos91376_0206.

Phylogenomic databases

eggNOGi COG0322.
HOGENOMi HOG000091770.
KOi K02342.
OMAi YTRKMDG.
OrthoDBi EOG6PKFH3.

Enzyme and pathway databases

BioCyci TROS309801:GI0S-205-MONOMER.

Family and domain databases

Gene3Di 3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
InterProi IPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
IPR001943. UVR_dom.
[Graphical view ]
Pfami PF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
PF02151. UVR. 1 hit.
[Graphical view ]
SMARTi SM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view ]
SUPFAMi SSF46600. SSF46600. 1 hit.
SSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsi TIGR00573. dnaq. 1 hit.
PROSITEi PS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
    Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
    PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27502 / DSM 5159 / P-2.

Entry informationi

Entry nameiB9KXM0_THERP
AccessioniPrimary (citable) accession number: B9KXM0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi