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B9KXM0 (B9KXM0_THERP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:trd_0207 EMBL ACM05471.1
OrganismThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) [Complete proteome] [HAMAP] EMBL ACM05471.1
Taxonomic identifier309801 [NCBI]
Taxonomic lineageBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium

Protein attributes

Sequence length693 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). SAAS SAAS013520

Sequence similarities

Contains UVR domain.

Sequences

Sequence LengthMass (Da)Tools
B9KXM0 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: E8D4DB9040100EE8

FASTA69377,438
        10         20         30         40         50         60 
MSDQPVEPAY DRLRSRARQL LLARGGIASE EQLIEGLFGS LGNRRLWAPF LAQLLETDAE 

        70         80         90        100        110        120 
IVRRPDGTWA LRRRPLVPSR GWPRSFVALD VETTGLRPAR HRIIEIGAVR YEDGCCVERF 

       130        140        150        160        170        180 
SVLVNPHRRL PVYIVRLTGI RDEDLLTAPS FVDVAAAFRV FLGESTVIGY NVGFDLDFLN 

       190        200        210        220        230        240 
AELRRIGQGP LPNPALDVLP LARALLTANG RYDLDAICRS IGLARGTRHR ALPDAEATAV 

       250        260        270        280        290        300 
LYLHLVERAE QVGYRSPSDL QPAATRRTIV VEPVARGRAV LDQRLLADTP ELPGVYLMRD 

       310        320        330        340        350        360 
ALGRVLYVGK ARNLRQRVRS YFSQPLGYTR KMDGLLESVA EIETVVTGSE LEALLLESQF 

       370        380        390        400        410        420 
VQRYKPPYNT QLRNHEAYPY VKVELGRPWP RLMLARQRDD DDAVYVGPFR STAAARSVVE 

       430        440        450        460        470        480 
LLHQLLPLRT CHRSFRDARS YGRPCLQLTL GRCIGPCTGC VTPDEYRALV DCALRYLSGE 

       490        500        510        520        530        540 
TSVVVERAQQ LLADAVERLD FERAARLRDL LRRSEELVFS HRLVRQTISG RPCVIVTPCP 

       550        560        570        580        590        600 
ETGDRAFLLI VAGRLWARVV ADPREHDAAV AARLGAAWER AQQAAPWTLD QDSLDAAVII 

       610        620        630        640        650        660 
ARWLSEHAED PTVFFLEHPV DWLALVRNGR SLPASAFAVH APVDDENGTT KRTRGADSER 

       670        680        690 
GTQCEGTPGK HRRARPSLHA LRSMADPHSG GAR 

« Hide

References

[1]"Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27502 / DSM 5159 / P-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001275 Genomic DNA. Translation: ACM05471.1.
RefSeqYP_002521462.1. NC_011959.1.

3D structure databases

ProteinModelPortalB9KXM0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING309801.trd_0207.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM05471; ACM05471; trd_0207.
GeneID7355256.
KEGGtro:trd_0207.
PATRIC23911636. VBITheRos91376_0206.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0322.
HOGENOMHOG000091770.
KOK02342.
OMAYTRKMDG.
OrthoDBEOG6PKFH3.
ProtClustDBCLSK2807441.

Enzyme and pathway databases

BioCycTROS309801:GI0S-205-MONOMER.

Family and domain databases

Gene3D3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
InterProIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
IPR001943. UVR_dom.
[Graphical view]
PfamPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
PF02151. UVR. 1 hit.
[Graphical view]
SMARTSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMSSF46600. SSF46600. 1 hit.
SSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsTIGR00573. dnaq. 1 hit.
PROSITEPS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9KXM0_THERP
AccessionPrimary (citable) accession number: B9KXM0
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)