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B9KXM0

- B9KXM0_THERP

UniProt

B9KXM0 - B9KXM0_THERP

Protein
Submitted name:

DNA polymerase III, epsilon subunit

Gene

trd_0207

Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
    3. exonuclease activity Source: InterPro

    Enzyme and pathway databases

    BioCyciTROS309801:GI0S-205-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase III, epsilon subunitImported
    Gene namesi
    Ordered Locus Names:trd_0207Imported
    OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
    Taxonomic identifieri309801 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
    ProteomesiUP000000447: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi309801.trd_0207.

    Structurei

    3D structure databases

    ProteinModelPortaliB9KXM0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains UVR domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG0322.
    HOGENOMiHOG000091770.
    KOiK02342.
    OMAiYTRKMDG.
    OrthoDBiEOG6PKFH3.

    Family and domain databases

    Gene3Di3.30.420.10. 1 hit.
    3.40.1440.10. 1 hit.
    4.10.860.10. 1 hit.
    InterProiIPR006054. DnaQ.
    IPR006055. Exonuclease.
    IPR013520. Exonuclease_RNaseT/DNA_pol3.
    IPR027299. GIY-YIG_dom.
    IPR000305. GIY-YIG_SF.
    IPR012337. RNaseH-like_dom.
    IPR001943. UVR_dom.
    [Graphical view]
    PfamiPF01541. GIY-YIG. 1 hit.
    PF00929. RNase_T. 1 hit.
    PF02151. UVR. 1 hit.
    [Graphical view]
    SMARTiSM00479. EXOIII. 1 hit.
    SM00465. GIYc. 1 hit.
    [Graphical view]
    SUPFAMiSSF46600. SSF46600. 1 hit.
    SSF53098. SSF53098. 1 hit.
    SSF82771. SSF82771. 1 hit.
    TIGRFAMsiTIGR00573. dnaq. 1 hit.
    PROSITEiPS50164. GIY_YIG. 1 hit.
    PS50151. UVR. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9KXM0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDQPVEPAY DRLRSRARQL LLARGGIASE EQLIEGLFGS LGNRRLWAPF    50
    LAQLLETDAE IVRRPDGTWA LRRRPLVPSR GWPRSFVALD VETTGLRPAR 100
    HRIIEIGAVR YEDGCCVERF SVLVNPHRRL PVYIVRLTGI RDEDLLTAPS 150
    FVDVAAAFRV FLGESTVIGY NVGFDLDFLN AELRRIGQGP LPNPALDVLP 200
    LARALLTANG RYDLDAICRS IGLARGTRHR ALPDAEATAV LYLHLVERAE 250
    QVGYRSPSDL QPAATRRTIV VEPVARGRAV LDQRLLADTP ELPGVYLMRD 300
    ALGRVLYVGK ARNLRQRVRS YFSQPLGYTR KMDGLLESVA EIETVVTGSE 350
    LEALLLESQF VQRYKPPYNT QLRNHEAYPY VKVELGRPWP RLMLARQRDD 400
    DDAVYVGPFR STAAARSVVE LLHQLLPLRT CHRSFRDARS YGRPCLQLTL 450
    GRCIGPCTGC VTPDEYRALV DCALRYLSGE TSVVVERAQQ LLADAVERLD 500
    FERAARLRDL LRRSEELVFS HRLVRQTISG RPCVIVTPCP ETGDRAFLLI 550
    VAGRLWARVV ADPREHDAAV AARLGAAWER AQQAAPWTLD QDSLDAAVII 600
    ARWLSEHAED PTVFFLEHPV DWLALVRNGR SLPASAFAVH APVDDENGTT 650
    KRTRGADSER GTQCEGTPGK HRRARPSLHA LRSMADPHSG GAR 693
    Length:693
    Mass (Da):77,438
    Last modified:March 24, 2009 - v1
    Checksum:iE8D4DB9040100EE8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001275 Genomic DNA. Translation: ACM05471.1.
    RefSeqiYP_002521462.1. NC_011959.1.

    Genome annotation databases

    EnsemblBacteriaiACM05471; ACM05471; trd_0207.
    GeneIDi7355256.
    KEGGitro:trd_0207.
    PATRICi23911636. VBITheRos91376_0206.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001275 Genomic DNA. Translation: ACM05471.1 .
    RefSeqi YP_002521462.1. NC_011959.1.

    3D structure databases

    ProteinModelPortali B9KXM0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 309801.trd_0207.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM05471 ; ACM05471 ; trd_0207 .
    GeneIDi 7355256.
    KEGGi tro:trd_0207.
    PATRICi 23911636. VBITheRos91376_0206.

    Phylogenomic databases

    eggNOGi COG0322.
    HOGENOMi HOG000091770.
    KOi K02342.
    OMAi YTRKMDG.
    OrthoDBi EOG6PKFH3.

    Enzyme and pathway databases

    BioCyci TROS309801:GI0S-205-MONOMER.

    Family and domain databases

    Gene3Di 3.30.420.10. 1 hit.
    3.40.1440.10. 1 hit.
    4.10.860.10. 1 hit.
    InterProi IPR006054. DnaQ.
    IPR006055. Exonuclease.
    IPR013520. Exonuclease_RNaseT/DNA_pol3.
    IPR027299. GIY-YIG_dom.
    IPR000305. GIY-YIG_SF.
    IPR012337. RNaseH-like_dom.
    IPR001943. UVR_dom.
    [Graphical view ]
    Pfami PF01541. GIY-YIG. 1 hit.
    PF00929. RNase_T. 1 hit.
    PF02151. UVR. 1 hit.
    [Graphical view ]
    SMARTi SM00479. EXOIII. 1 hit.
    SM00465. GIYc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46600. SSF46600. 1 hit.
    SSF53098. SSF53098. 1 hit.
    SSF82771. SSF82771. 1 hit.
    TIGRFAMsi TIGR00573. dnaq. 1 hit.
    PROSITEi PS50164. GIY_YIG. 1 hit.
    PS50151. UVR. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
      Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
      PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27502 / DSM 5159 / P-2Imported.

    Entry informationi

    Entry nameiB9KXM0_THERP
    AccessioniPrimary (citable) accession number: B9KXM0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3