B9KXE5 (B9KXE5_THERP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisphosphate carboxylase EMBL ACM05757.1
EC=4.1.1.39 EMBL ACM05757.1

Gene names

Ordered Locus Names:

trd_0132 EMBL ACM05757.1

Organism

Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) [Complete proteome] [HAMAP] EMBL ACM05757.1

Taxonomic identifier

309801 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chloroflexi › Thermomicrobia › Thermomicrobiales › Thermomicrobiaceae › Thermomicrobium › Thermomicrobium roseum

Protein attributes

Sequence length	418 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ACM05757.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9KXE5 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 3C8D6CE79D1FD668	FASTA	418	46,265
	10 20 30 40 50 60 MSFVRATYYV ETPLTLEAAA EALASEQSTG TFIAVPLETA ELKARYRARI ERIELIETRS 70 80 90 100 110 120 RPTLPGSRPA SGSYQCGFVE LAFPLENMGC NLPTLMATLA GNLFELSELS AIRLVDLDLP 130 140 150 160 170 180 DEFAQAYTGP RFGIQGTRDI AQVYDRPLIG TIIKPSVGLS PEQTAVVVRE LVEAGIDFIK 190 200 210 220 230 240 DDELMANPPH NPLPARARAV MRVIRDYADR TGKYVIYAFN ISDRLEDMIR HIEILVEEGA 250 260 270 280 290 300 RCCMVSLNWV GIAAFDYLRR NCPLIIHGHR NGWGMMTRAP GLGMDFRAYQ KIWRLAGVDH 310 320 330 340 350 360 LHVNGLANKF WEPDDSVVRS IHDMLQPLFG GYFAMPVISS GQWGGQAPDT YRRCRTIDLL 370 380 390 400 410 YLAGGGIFAH PHGVAAGIRA IREAWEAAVA GISLAEYAQT HPDLAAALHH FGTARRGR

References

[1]

"Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum." Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A. PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27502 / DSM 5159 / P-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001275 Genomic DNA. Translation: ACM05757.1.
RefSeq	YP_002521387.1. NC_011959.1.
3D structure databases
ProteinModelPortal	B9KXE5.
ModBase	Search...
Protein-protein interaction databases
STRING	309801.trd_0132.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACM05757; ACM05757; trd_0132.
GeneID	7355673.
KEGG	tro:trd_0132.
PATRIC	23911490. VBITheRos91376_0133.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000230831.
KO	K01601.
OMA	NITDEVD.
ProtClustDB	CLSK2546562.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9KXE5_THERP

Accession

Primary (citable) accession number: B9KXE5

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)