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B9KXE5 (B9KXE5_THERP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ACM05757.1
Gene names
Ordered Locus Names:trd_0132 EMBL ACM05757.1
OrganismThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) [Complete proteome] [HAMAP] EMBL ACM05757.1
Taxonomic identifier309801 [NCBI]
Taxonomic lineageBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACM05757.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9KXE5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 3C8D6CE79D1FD668

FASTA41846,265
        10         20         30         40         50         60 
MSFVRATYYV ETPLTLEAAA EALASEQSTG TFIAVPLETA ELKARYRARI ERIELIETRS 

        70         80         90        100        110        120 
RPTLPGSRPA SGSYQCGFVE LAFPLENMGC NLPTLMATLA GNLFELSELS AIRLVDLDLP 

       130        140        150        160        170        180 
DEFAQAYTGP RFGIQGTRDI AQVYDRPLIG TIIKPSVGLS PEQTAVVVRE LVEAGIDFIK 

       190        200        210        220        230        240 
DDELMANPPH NPLPARARAV MRVIRDYADR TGKYVIYAFN ISDRLEDMIR HIEILVEEGA 

       250        260        270        280        290        300 
RCCMVSLNWV GIAAFDYLRR NCPLIIHGHR NGWGMMTRAP GLGMDFRAYQ KIWRLAGVDH 

       310        320        330        340        350        360 
LHVNGLANKF WEPDDSVVRS IHDMLQPLFG GYFAMPVISS GQWGGQAPDT YRRCRTIDLL 

       370        380        390        400        410 
YLAGGGIFAH PHGVAAGIRA IREAWEAAVA GISLAEYAQT HPDLAAALHH FGTARRGR 

« Hide

References

[1]"Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27502 / DSM 5159 / P-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001275 Genomic DNA. Translation: ACM05757.1.
RefSeqYP_002521387.1. NC_011959.1.

3D structure databases

ProteinModelPortalB9KXE5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING309801.trd_0132.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM05757; ACM05757; trd_0132.
GeneID7355673.
KEGGtro:trd_0132.
PATRIC23911490. VBITheRos91376_0133.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAVIVTFRV.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycTROS309801:GI0S-130-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9KXE5_THERP
AccessionPrimary (citable) accession number: B9KXE5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)