Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ribulose bisphosphate carboxylase

Gene

trd_0132

Organism
Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciTROS309801:GI0S-130-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:trd_0132Imported
OrganismiThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)Imported
Taxonomic identifieri309801 [NCBI]
Taxonomic lineageiBacteriaChloroflexiThermomicrobialesThermomicrobiaceaeThermomicrobium
ProteomesiUP000000447 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309801.trd_0132.

Structurei

3D structure databases

ProteinModelPortaliB9KXE5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMVSINSI.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9KXE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFVRATYYV ETPLTLEAAA EALASEQSTG TFIAVPLETA ELKARYRARI
60 70 80 90 100
ERIELIETRS RPTLPGSRPA SGSYQCGFVE LAFPLENMGC NLPTLMATLA
110 120 130 140 150
GNLFELSELS AIRLVDLDLP DEFAQAYTGP RFGIQGTRDI AQVYDRPLIG
160 170 180 190 200
TIIKPSVGLS PEQTAVVVRE LVEAGIDFIK DDELMANPPH NPLPARARAV
210 220 230 240 250
MRVIRDYADR TGKYVIYAFN ISDRLEDMIR HIEILVEEGA RCCMVSLNWV
260 270 280 290 300
GIAAFDYLRR NCPLIIHGHR NGWGMMTRAP GLGMDFRAYQ KIWRLAGVDH
310 320 330 340 350
LHVNGLANKF WEPDDSVVRS IHDMLQPLFG GYFAMPVISS GQWGGQAPDT
360 370 380 390 400
YRRCRTIDLL YLAGGGIFAH PHGVAAGIRA IREAWEAAVA GISLAEYAQT
410
HPDLAAALHH FGTARRGR
Length:418
Mass (Da):46,265
Last modified:March 24, 2009 - v1
Checksum:i3C8D6CE79D1FD668
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001275 Genomic DNA. Translation: ACM05757.1.
RefSeqiWP_012641545.1. NC_011959.1.
YP_002521387.1. NC_011959.1.

Genome annotation databases

EnsemblBacteriaiACM05757; ACM05757; trd_0132.
KEGGitro:trd_0132.
PATRICi23911490. VBITheRos91376_0133.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001275 Genomic DNA. Translation: ACM05757.1.
RefSeqiWP_012641545.1. NC_011959.1.
YP_002521387.1. NC_011959.1.

3D structure databases

ProteinModelPortaliB9KXE5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi309801.trd_0132.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACM05757; ACM05757; trd_0132.
KEGGitro:trd_0132.
PATRICi23911490. VBITheRos91376_0133.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMVSINSI.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciTROS309801:GI0S-130-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum."
    Wu D., Raymond J., Wu M., Chatterji S., Ren Q., Graham J.E., Bryant D.A., Robb F., Colman A., Tallon L.J., Badger J.H., Madupu R., Ward N.L., Eisen J.A.
    PLoS ONE 4:E4207-E4207(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27502 / DSM 5159 / P-2Imported.

Entry informationi

Entry nameiB9KXE5_THERP
AccessioniPrimary (citable) accession number: B9KXE5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: April 1, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.