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B9KRR2 (B9KRR2_RHOSK) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RSKD131_0994 EMBL ACM00854.1
OrganismRhodobacter sphaeroides (strain KD131 / KCTC 12085) [Complete proteome] [HAMAP] EMBL ACM00854.1
Taxonomic identifier557760 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Protein attributes

Sequence length877 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B9KRR2 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 03568BF0C300C671

FASTA87796,832
        10         20         30         40         50         60 
MSRQEPPMPA NPRQDLDRYR AKRDFARTPE PQGRSEAPRP EAESLSFVVQ KHAASRLHWD 

        70         80         90        100        110        120 
FRLEWNGVLL SWAVTRGPSP DPSARRLAVR TEDHPLDYAE FEGTIPKGEY GGGTVMLWDR 

       130        140        150        160        170        180 
GTWEPQGDFA EGLRTGQLKI RLAGERMRGR WTLVRMKPRP REKAENWLLI KEHDVHESAQ 

       190        200        210        220        230        240 
TEELVERHMT SVATGRTMEQ IAAGKAPPRR TRKAALPAFR PLQLARLVSA APEGEDWIHE 

       250        260        270        280        290        300 
TKFDGYRCLA ALAGGRARLY TRSGLDWTAK FGALVEDIEA LEAQEALIDG EVIAPGREGG 

       310        320        330        340        350        360 
SFSELQARLK SGGQLLFMAF DLLALDGEDL TGQPLLARKE RLETLIGKGR GAVRFSGHIR 

       370        380        390        400        410        420 
GHGPEVHERI CAAGLEGIVS KRASAPYAGS RNGDWLKVKC THRQEFVICG WNASDKPGRP 

       430        440        450        460        470        480 
FASLVMGSYE KSRLVYRGSV GSGFGAPLFR ELKPLLAERA QGACPFGRTP AKAKGAHWLK 

       490        500        510        520        530        540 
PELVAEVSFT ELTAEGHIRH GVFAGLRSDK DAREVRLEKP APEKPAPRPR KARAGKKGTK 

       550        560        570        580        590        600 
TARPDAPSPD EPAPEPARKH RKSGGEKKET TMARPDDLRV AGIRISHPDR RIYDRPAVTK 

       610        620        630        640        650        660 
REVAEHAEAL APRMLRFLKD RPVSLLRCPD GAAGECFFQK HRTRGMPVAM KTVPVETKSG 

       670        680        690        700        710        720 
LEDFITLPDV AALVGATQMG TLEFHIWGSR NRSLQRPDRL VFDLDPDESL DFAHVRTAAA 

       730        740        750        760        770        780 
ELRGLLTDLG LPSVPMLSGG KGVHVIVPLK PKAEWESVKL FSRALATHLA QEAPDRYTAT 

       790        800        810        820        830        840 
MAKAGRKGRI FIDWLRNDRG STAIAPYSLR ARPGAPVATP VDWDELASAR SGGDWTIRSI 

       850        860        870 
RDRLDRPCPL AEASARPATL GRTVIGRLER LVAGGKP 

« Hide

References

[1]"Complete genome sequence of Rhodobacter sphaeroides KD131."
Lim S.K., Kim S.J., Cha S.H., Oh Y.K., Rhee H.J., Kim M.S., Lee J.K.
J. Bacteriol. 191:1118-1119(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KD131 / KCTC 12085.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001150 Genomic DNA. Translation: ACM00854.1.
RefSeqYP_002525355.1. NC_011963.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING557760.RSKD131_0994.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM00854; ACM00854; RSKD131_0994.
GeneID7359531.
KEGGrsk:RSKD131_0994.
PATRIC23181089. VBIRhoSph125910_2409.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMADWTIRSI.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycRSPH557760:GH1P-1003-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9KRR2_RHOSK
AccessionPrimary (citable) accession number: B9KRR2
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)