Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B9KRR2

- B9KRR2_RHOSK

UniProt

B9KRR2 - B9KRR2_RHOSK

Protein
Submitted name:

ATP dependent DNA ligase

Gene

RSKD131_0994

Organism
Rhodobacter sphaeroides (strain KD131 / KCTC 12085)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRSPH557760:GH1P-1003-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:RSKD131_0994Imported
    OrganismiRhodobacter sphaeroides (strain KD131 / KCTC 12085)Imported
    Taxonomic identifieri557760 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
    ProteomesiUP000001597: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi557760.RSKD131_0994.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiDWTIRSI.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9KRR2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSRQEPPMPA NPRQDLDRYR AKRDFARTPE PQGRSEAPRP EAESLSFVVQ    50
    KHAASRLHWD FRLEWNGVLL SWAVTRGPSP DPSARRLAVR TEDHPLDYAE 100
    FEGTIPKGEY GGGTVMLWDR GTWEPQGDFA EGLRTGQLKI RLAGERMRGR 150
    WTLVRMKPRP REKAENWLLI KEHDVHESAQ TEELVERHMT SVATGRTMEQ 200
    IAAGKAPPRR TRKAALPAFR PLQLARLVSA APEGEDWIHE TKFDGYRCLA 250
    ALAGGRARLY TRSGLDWTAK FGALVEDIEA LEAQEALIDG EVIAPGREGG 300
    SFSELQARLK SGGQLLFMAF DLLALDGEDL TGQPLLARKE RLETLIGKGR 350
    GAVRFSGHIR GHGPEVHERI CAAGLEGIVS KRASAPYAGS RNGDWLKVKC 400
    THRQEFVICG WNASDKPGRP FASLVMGSYE KSRLVYRGSV GSGFGAPLFR 450
    ELKPLLAERA QGACPFGRTP AKAKGAHWLK PELVAEVSFT ELTAEGHIRH 500
    GVFAGLRSDK DAREVRLEKP APEKPAPRPR KARAGKKGTK TARPDAPSPD 550
    EPAPEPARKH RKSGGEKKET TMARPDDLRV AGIRISHPDR RIYDRPAVTK 600
    REVAEHAEAL APRMLRFLKD RPVSLLRCPD GAAGECFFQK HRTRGMPVAM 650
    KTVPVETKSG LEDFITLPDV AALVGATQMG TLEFHIWGSR NRSLQRPDRL 700
    VFDLDPDESL DFAHVRTAAA ELRGLLTDLG LPSVPMLSGG KGVHVIVPLK 750
    PKAEWESVKL FSRALATHLA QEAPDRYTAT MAKAGRKGRI FIDWLRNDRG 800
    STAIAPYSLR ARPGAPVATP VDWDELASAR SGGDWTIRSI RDRLDRPCPL 850
    AEASARPATL GRTVIGRLER LVAGGKP 877
    Length:877
    Mass (Da):96,832
    Last modified:March 24, 2009 - v1
    Checksum:i03568BF0C300C671
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001150 Genomic DNA. Translation: ACM00854.1.
    RefSeqiWP_015920443.1. NC_011963.1.
    YP_002525355.1. NC_011963.1.

    Genome annotation databases

    EnsemblBacteriaiACM00854; ACM00854; RSKD131_0994.
    GeneIDi7359531.
    KEGGirsk:RSKD131_0994.
    PATRICi23181089. VBIRhoSph125910_2409.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001150 Genomic DNA. Translation: ACM00854.1 .
    RefSeqi WP_015920443.1. NC_011963.1.
    YP_002525355.1. NC_011963.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 557760.RSKD131_0994.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM00854 ; ACM00854 ; RSKD131_0994 .
    GeneIDi 7359531.
    KEGGi rsk:RSKD131_0994.
    PATRICi 23181089. VBIRhoSph125910_2409.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi DWTIRSI.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci RSPH557760:GH1P-1003-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Rhodobacter sphaeroides KD131."
      Lim S.-K., Kim S.J., Cha S.H., Oh Y.-K., Rhee H.-J., Kim M.-S., Lee J.K.
      J. Bacteriol. 191:1118-1119(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KD131 / KCTC 12085Imported.

    Entry informationi

    Entry nameiB9KRR2_RHOSK
    AccessioniPrimary (citable) accession number: B9KRR2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3