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B9KQ81

- B9KQ81_RHOSK

UniProt

B9KQ81 - B9KQ81_RHOSK

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Protein
Submitted name: ATP dependent DNA ligase
Gene
RSKD131_0728
Organism
Rhodobacter sphaeroides (strain KD131 / KCTC 12085)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRSPH557760:GH1P-736-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:RSKD131_0728Imported
OrganismiRhodobacter sphaeroides (strain KD131 / KCTC 12085)Imported
Taxonomic identifieri557760 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
ProteomesiUP000001597: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi557760.RSKD131_0728.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9KQ81-1 [UniParc]FASTAAdd to Basket

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MKRFAALFDL LDRTTRTSAK VAALADYFRT APEEDRVWTI GLLSGRRPKR    50
AVNTTELRSW AAEASGLPVW LAEEVHPIVG DLAETISLLL PEPSQTSDRT 100
LDGWMRELVS LTGRPAEVRR AAILDAWDRL STPERFLFNK LITGGFRMGV 150
SQGLMTRALA QATGVDEAVL AHRLMGDWKP GRIGFETLIG AHDPEADASK 200
PYPFALASPV EEVAALGDPA DWLAEWKWDG IRGQLVNRAG AFALWSRGEE 250
LVTDRFPDLA PLRDFLPPGL VIDAEVLAWG GEGPLPFAAL QKRIGRLTVP 300
KKILAEAPAH LLAYDLLEEN GEDLRAAPLA HRRARLEAVL AALPPGVPIS 350
PSPLVAFDDW ETLGGIRATA REKIAEGLML KRASSPYFVG RKRGDWWKWK 400
LDPYTVDAVM LYAQQGAGRR ATLFTDFTFG VRDGDDLVPF TKAYSGLTDA 450
EFRQITDWVR KNTLERFGPV RRVPPELVFE LAFEGIQASP RHKSGIALRF 500
PRMVRWRKDK PAAEIDTLES LRELLAATGG AAP 533
Length:533
Mass (Da):58,988
Last modified:March 24, 2009 - v1
Checksum:iDAF725E17D390678
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001150 Genomic DNA. Translation: ACM00588.1.
RefSeqiYP_002525089.1. NC_011963.1.

Genome annotation databases

EnsemblBacteriaiACM00588; ACM00588; RSKD131_0728.
GeneIDi7357635.
KEGGirsk:RSKD131_0728.
PATRICi23180549. VBIRhoSph125910_2142.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001150 Genomic DNA. Translation: ACM00588.1 .
RefSeqi YP_002525089.1. NC_011963.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 557760.RSKD131_0728.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM00588 ; ACM00588 ; RSKD131_0728 .
GeneIDi 7357635.
KEGGi rsk:RSKD131_0728.
PATRICi 23180549. VBIRhoSph125910_2142.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci RSPH557760:GH1P-736-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Rhodobacter sphaeroides KD131."
    Lim S.K., Kim S.J., Cha S.H., Oh Y.K., Rhee H.J., Kim M.S., Lee J.K.
    J. Bacteriol. 191:1118-1119(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KD131 / KCTC 12085.

Entry informationi

Entry nameiB9KQ81_RHOSK
AccessioniPrimary (citable) accession number: B9KQ81
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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