B9KQ81 (B9KQ81_RHOSK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACM00588.1

Gene names

Ordered Locus Names:

RSKD131_0728 EMBL ACM00588.1

Organism

Rhodobacter sphaeroides (strain KD131 / KCTC 12085) [Complete proteome] [HAMAP] EMBL ACM00588.1

Taxonomic identifier

557760 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter › Rhodobacter sphaeroides

Protein attributes

Sequence length	533 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACM00588.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9KQ81 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: DAF725E17D390678	FASTA	533	58,988
	10 20 30 40 50 60 MKRFAALFDL LDRTTRTSAK VAALADYFRT APEEDRVWTI GLLSGRRPKR AVNTTELRSW 70 80 90 100 110 120 AAEASGLPVW LAEEVHPIVG DLAETISLLL PEPSQTSDRT LDGWMRELVS LTGRPAEVRR 130 140 150 160 170 180 AAILDAWDRL STPERFLFNK LITGGFRMGV SQGLMTRALA QATGVDEAVL AHRLMGDWKP 190 200 210 220 230 240 GRIGFETLIG AHDPEADASK PYPFALASPV EEVAALGDPA DWLAEWKWDG IRGQLVNRAG 250 260 270 280 290 300 AFALWSRGEE LVTDRFPDLA PLRDFLPPGL VIDAEVLAWG GEGPLPFAAL QKRIGRLTVP 310 320 330 340 350 360 KKILAEAPAH LLAYDLLEEN GEDLRAAPLA HRRARLEAVL AALPPGVPIS PSPLVAFDDW 370 380 390 400 410 420 ETLGGIRATA REKIAEGLML KRASSPYFVG RKRGDWWKWK LDPYTVDAVM LYAQQGAGRR 430 440 450 460 470 480 ATLFTDFTFG VRDGDDLVPF TKAYSGLTDA EFRQITDWVR KNTLERFGPV RRVPPELVFE 490 500 510 520 530 LAFEGIQASP RHKSGIALRF PRMVRWRKDK PAAEIDTLES LRELLAATGG AAP

References

[1]	"Complete genome sequence of Rhodobacter sphaeroides KD131." Lim S.K., Kim S.J., Cha S.H., Oh Y.K., Rhee H.J., Kim M.S., Lee J.K. J. Bacteriol. 191:1118-1119(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KD131 / KCTC 12085.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001150 Genomic DNA. Translation: ACM00588.1.
RefSeq	YP_002525089.1. NC_011963.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	557760.RSKD131_0728.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACM00588; ACM00588; RSKD131_0728.
GeneID	7357635.
KEGG	rsk:RSKD131_0728.
PATRIC	23180549. VBIRhoSph125910_2142.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	RSPH557760:GH1P-736-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9KQ81_RHOSK

Accession

Primary (citable) accession number: B9KQ81

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	May 29, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)