B9KML6 (B9KML6_RHOSK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptide deformylase RuleBase RU003335

Gene names

Ordered Locus Names:

RSKD131_2247

Organism

Rhodobacter sphaeroides (strain KD131 / KCTC 12085) [Complete proteome] [HAMAP]

Taxonomic identifier

557760 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length	167 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Formyl-L-methionyl peptide + H2O = formate + methionyl peptide. SAAS SAAS000181
Sequence similarities	Belongs to the polypeptide deformylase family. RuleBase RU003335

Ontologies

Keywords
Biological process	Protein biosynthesis SAAS SAAS000181
Ligand	Metal-binding SAAS SAAS000181
Molecular function	Hydrolase SAAS SAAS000181
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	iron ion binding Inferred from electronic annotation. Source: InterPro peptide deformylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9KML6 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 98631009E18885F9	FASTA	167	18,757
	10 20 30 40 50 60 MIRPFVMYPD KRLKTVATPV EAVTDEIRAI WTDMIETMDA MPGYGLAAPQ IGVMLRLAVV 70 80 90 100 110 120 DCSESRGKAI RLANPEILHA SGQFREHEEG SPNLPGASAV ISRPRAVTVR FLNEAGETEE 130 140 150 160 RDFVDIWATS VQHQIDHLDG RLYIDRLSPL KRKMVVAKSE KYLRRVG

References

[1]	"Complete genome sequence of Rhodobacter sphaeroides KD131." Lim S.-K., Kim S.J., Cha S.H., Oh Y.-K., Rhee H.-J., Kim M.-S., Lee J.K. J. Bacteriol. 191:1118-1119(2009) [PubMed: 19028901] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001150 Genomic DNA. Translation: ACM02107.1.
RefSeq	YP_002526608.1. NC_011963.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B9KML6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7359343.
GenomeReviews	Gene locus RSKD131_2247 in contig CP001150_GR.
KEGG	rsk:RSKD131_2247.
PATRIC	23183617. VBIRhoSph125910_3653.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	QHQIDHL.
ProtClustDB	CLSK934097.
Family and domain databases
HAMAP	MF_00163. Pep_deformylase. [Tree]
InterPro	IPR000181. Fmet_deformylase. IPR023635. Peptide_deformylase. [Graphical view]
Gene3D	G3DSA:3.90.45.10. Fmet_deformylase. 1 hit.
KO	K01462.
PANTHER	PTHR10458. Fmet_deformylase. 1 hit.
Pfam	PF01327. Pep_deformylase. 1 hit. [Graphical view]
PIRSF	PIRSF004749. Pep_def. 1 hit.
PRINTS	PR01576. PDEFORMYLASE.
SUPFAM	SSF56420. Fmet_deformylase. 1 hit.
TIGRFAMs	TIGR00079. Pept_deformyl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9KML6_RHOSK

Accession

Primary (citable) accession number: B9KML6

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)