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B9KKA1

- RPIA_RHOSK

UniProt

B9KKA1 - RPIA_RHOSK

Protein

Ribose-5-phosphate isomerase A

Gene

rpiA

Organism
Rhodobacter sphaeroides (strain KD131 / KCTC 12085)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.UniRule annotation

    Catalytic activityi

    D-ribose 5-phosphate = D-ribulose 5-phosphate.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei111 – 1111Proton acceptorUniRule annotation
    Binding sitei129 – 1291SubstrateUniRule annotation

    GO - Molecular functioni

    1. ribose-5-phosphate isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pentose-phosphate shunt, non-oxidative branch Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Isomerase

    Enzyme and pathway databases

    BioCyciRSPH557760:GH1P-1710-MONOMER.
    UniPathwayiUPA00115; UER00412.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribose-5-phosphate isomerase AUniRule annotation (EC:5.3.1.6UniRule annotation)
    Alternative name(s):
    Phosphoriboisomerase AUniRule annotation
    Short name:
    PRIUniRule annotation
    Gene namesi
    Name:rpiAUniRule annotation
    Ordered Locus Names:RSKD131_1688
    OrganismiRhodobacter sphaeroides (strain KD131 / KCTC 12085)
    Taxonomic identifieri557760 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
    ProteomesiUP000001597: Chromosome 1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 262262Ribose-5-phosphate isomerase APRO_1000194718Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Protein-protein interaction databases

    STRINGi557760.RSKD131_1688.

    Structurei

    3D structure databases

    ProteinModelPortaliB9KKA1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni33 – 364Substrate bindingUniRule annotation
    Regioni89 – 924Substrate bindingUniRule annotation
    Regioni102 – 1054Substrate bindingUniRule annotation

    Sequence similaritiesi

    Belongs to the ribose 5-phosphate isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0120.
    HOGENOMiHOG000276369.
    KOiK01807.
    OMAiSQRMIVI.
    OrthoDBiEOG67MF61.

    Family and domain databases

    HAMAPiMF_00170. Rib_5P_isom_A.
    InterProiIPR004788. Ribose5P_isomerase_typA.
    IPR020672. Ribose5P_isomerase_typA_subgr.
    [Graphical view]
    PANTHERiPTHR11934. PTHR11934. 1 hit.
    PfamiPF06026. Rib_5-P_isom_A. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00021. rpiA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9KKA1-1 [UniParc]FASTAAdd to Basket

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    MPAELSPIDT AKFAAARRAV DLVQDGMKLG LGTGSTAAWM VRCLAERVRE    50
    EGLRVQGVPT STRTAELARA LGIQVVTLDE AKWLDLTIDG ADEFDADFNL 100
    IKGGGAALLQ EKIVATASDR MVVIADAAKE VAHLGAFPLP VEVIPFGWQS 150
    TKMLIEETLE GMDVLGREVT LRLSGDAPLL TDEKNYILDL HLKRIGEPRK 200
    LGLALNQIAG VVENGLFIDI CDTVVVGHGD GRVSLRDLQS GQAEEGFIDM 250
    DRARNIFADL GD 262
    Length:262
    Mass (Da):28,203
    Last modified:March 24, 2009 - v1
    Checksum:i5F33057581BFC36E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001150 Genomic DNA. Translation: ACM01548.1.
    RefSeqiWP_015920904.1. NC_011963.1.
    YP_002526049.1. NC_011963.1.

    Genome annotation databases

    EnsemblBacteriaiACM01548; ACM01548; RSKD131_1688.
    GeneIDi7360383.
    KEGGirsk:RSKD131_1688.
    PATRICi23182482. VBIRhoSph125910_3092.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001150 Genomic DNA. Translation: ACM01548.1 .
    RefSeqi WP_015920904.1. NC_011963.1.
    YP_002526049.1. NC_011963.1.

    3D structure databases

    ProteinModelPortali B9KKA1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 557760.RSKD131_1688.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM01548 ; ACM01548 ; RSKD131_1688 .
    GeneIDi 7360383.
    KEGGi rsk:RSKD131_1688.
    PATRICi 23182482. VBIRhoSph125910_3092.

    Phylogenomic databases

    eggNOGi COG0120.
    HOGENOMi HOG000276369.
    KOi K01807.
    OMAi SQRMIVI.
    OrthoDBi EOG67MF61.

    Enzyme and pathway databases

    UniPathwayi UPA00115 ; UER00412 .
    BioCyci RSPH557760:GH1P-1710-MONOMER.

    Family and domain databases

    HAMAPi MF_00170. Rib_5P_isom_A.
    InterProi IPR004788. Ribose5P_isomerase_typA.
    IPR020672. Ribose5P_isomerase_typA_subgr.
    [Graphical view ]
    PANTHERi PTHR11934. PTHR11934. 1 hit.
    Pfami PF06026. Rib_5-P_isom_A. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00021. rpiA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Rhodobacter sphaeroides KD131."
      Lim S.-K., Kim S.J., Cha S.H., Oh Y.-K., Rhee H.-J., Kim M.-S., Lee J.K.
      J. Bacteriol. 191:1118-1119(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KD131 / KCTC 12085.

    Entry informationi

    Entry nameiRPIA_RHOSK
    AccessioniPrimary (citable) accession number: B9KKA1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3