B9KJP0 (RS6_RHOSK) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	RSKD131_1477

Organism

Rhodobacter sphaeroides (strain KD131 / KCTC 12085) [Complete proteome] [HAMAP]

Taxonomic identifier

557760 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length	135 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP MF_00360
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 135	135	30S ribosomal protein S6 HAMAP MF_00360		PRO_1000133541

Sequences

	Sequence		Length	Mass (Da)
	B9KJP0 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 16C41BC326C5444E	FASTA	135	15,520
	10 20 30 40 50 60 MSLYEHVFIA RQDLSNAQAE GLIEHFSTVL ADNGGKVVDR EYWGVKTMAY KINKNRKGHY 70 80 90 100 110 120 AFLKSDAPSA AVQEMERLMR LHDDVMRVLT IKVDKHAEGP SIQMQKRDER ERGDRGDRSD 130 RGDRGDRGDR GGFRR

References

[1]	"Complete genome sequence of Rhodobacter sphaeroides KD131." Lim S.-K., Kim S.J., Cha S.H., Oh Y.-K., Rhee H.-J., Kim M.-S., Lee J.K. J. Bacteriol. 191:1118-1119(2009) [PubMed: 19028901] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KD131 / KCTC 12085.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001150 Genomic DNA. Translation: ACM01337.1.
RefSeq	YP_002525838.1. NC_011963.1.
3D structure databases
ProteinModelPortal	B9KJP0.
ModBase	Search...
Protein-protein interaction databases
STRING	B9KJP0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7358065.
GenomeReviews	Gene locus RSKD131_1477 in contig CP001150_GR.
KEGG	rsk:RSKD131_1477.
PATRIC	23182054. VBIRhoSph125910_2881.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	ITEASPM.
ProtClustDB	PRK00453.
Family and domain databases
HAMAP	MF_00360. Ribosomal_S6. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR020814. Ribosomal_S6_plastid/chlpt. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
KO	K02990.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
SUPFAM	SSF54995. Ribosomal_S6. 1 hit.
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_RHOSK

Accession

Primary (citable) accession number: B9KJP0

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	March 24, 2009
Last modified:	January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program