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B9KHN3 (DCD_ANAMF) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Deoxycytidine triphosphate deaminase

Short name=dCTP deaminase
EC=3.5.4.13
Gene names
Name:dcd
Ordered Locus Names:AMF_107
OrganismAnaplasma marginale (strain Florida) [Complete proteome] [HAMAP]
Taxonomic identifier320483 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeAnaplasma

Protein attributes

Sequence length185 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processNucleotide metabolism
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processdUMP biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

dUTP biosynthetic process

Inferred from electronic annotation. Source: InterPro

pyrimidine ribonucleotide biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functiondCTP deaminase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 185185Deoxycytidine triphosphate deaminase HAMAP-Rule MF_00146
PRO_1000123135

Sequences

Sequence LengthMass (Da)Tools
B9KHN3 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: CC356B6E1C9D566D

FASTA18520,573
        10         20         30         40         50         60 
MSAMPDHWIK EKALKEGMIS PFVDHKEEAG VLSYGLSSYG YDARVDSKFK IFANTHSSIV 

        70         80         90        100        110        120 
DPKNFPQDSF IDKETDVCIM PPNSFMLAKT VEYFRIPKDV IVICVGKSTY ARCGIVVSVT 

       130        140        150        160        170        180 
PLEPGWEGYV TLEFSNTAPL PVKVYAFEGA CQFIFLAGNE RCSISYDQVN GKYMRQGGVT 


LPIVS 

« Hide

References

[1]"Conservation in the face of diversity: multistrain analysis of an intracellular bacterium."
Dark M.J., Herndon D.R., Kappmeyer L.S., Gonzales M.P., Nordeen E., Palmer G.H., Knowles D.P. Jr., Brayton K.A.
BMC Genomics 10:16-16(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Florida.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001079 Genomic DNA. Translation: ACM48995.1.
RefSeqYP_002563251.1. NC_012026.1.

3D structure databases

ProteinModelPortalB9KHN3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING320483.AMF_107.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM48995; ACM48995; AMF_107.
GeneID7398569.
KEGGamf:AMF_107.
PATRIC20943945. VBIAnaMar82315_0126.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0717.
HOGENOMHOG000228600.
KOK01494.
OrthoDBEOG67DPKR.

Enzyme and pathway databases

BioCycAMAR320483:GIWE-106-MONOMER.
UniPathwayUPA00610; UER00665.

Family and domain databases

Gene3D2.70.40.10. 1 hit.
HAMAPMF_00146. dCTP_deaminase.
InterProIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
[Graphical view]
SUPFAMSSF51283. SSF51283. 1 hit.
TIGRFAMsTIGR02274. dCTP_deam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameDCD_ANAMF
AccessionPrimary (citable) accession number: B9KHN3
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways