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Protein

Superoxide dismutase

Gene

sodB

Organism
Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi26Divalent metal cationUniRule annotation1
Metal bindingi73Divalent metal cationUniRule annotation1
Metal bindingi161Divalent metal cationUniRule annotation1
Metal bindingi165Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciCLAR306263:G1GB2-50-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:Cla_0050Imported
OrganismiCampylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)Imported
Taxonomic identifieri306263 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
Proteomesi
  • UP000007727 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi306263.Cla_0050

Structurei

3D structure databases

ProteinModelPortaliB9KED2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 80Sod_Fe_NInterPro annotationAdd BLAST79
Domaini94 – 193Sod_Fe_CInterPro annotationAdd BLAST100

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiKWGSFDK
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

B9KED2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFELRKLPYE ADAFGDFLSA ETFAFHHGKH HQTYVNNLNN LIKDTEFVGK
60 70 80 90 100
DLVYIIQNSN GGVFNNAAQV YNHDFYFDCI KPKTCCGCGC SLSDEFKAAV
110 120 130 140 150
EKDFGSMENL KEEFIKGATG VFGSGWFWLV YNTQNQKLEL VATSNAATPI
160 170 180 190 200
TEGKVPLLVV DVWEHAYYVD HRNARPAYLD KFYAHINWEF VAKAYEWAIK
210
EGMNSVSFYA NELHPVK
Length:217
Mass (Da):24,769
Last modified:March 24, 2009 - v1
Checksum:iB374D42236236430
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000932 Genomic DNA Translation: ACM63417.1
RefSeqiWP_012660803.1, NC_012039.1

Genome annotation databases

EnsemblBacteriaiACM63417; ACM63417; Cla_0050
GeneIDi7410611
KEGGicla:Cla_0050
PATRICifig|306263.5.peg.50

Similar proteinsi

Entry informationi

Entry nameiB9KED2_CAMLR
AccessioniPrimary (citable) accession number: B9KED2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: March 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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