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B9KD17

- B9KD17_CAMLR

UniProt

B9KD17 - B9KD17_CAMLR

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Protein

Alanine racemase

Gene

alr

Organism
Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotation

Cofactori

Pyridoxal phosphate.UniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei33 – 331Proton acceptor; specific for D-alanineUniRule annotation
Binding sitei118 – 1181SubstrateUniRule annotation
Active sitei244 – 2441Proton acceptor; specific for L-alanineUniRule annotation
Binding sitei290 – 2901Substrate; via amide nitrogenUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciCLAR306263:GH7X-1132-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Name:alrImported
Ordered Locus Names:Cla_1134Imported
OrganismiCampylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)Imported
Taxonomic identifieri306263 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000007727: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei33 – 331N6-(pyridoxal phosphate)lysineUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi306263.Cla_1134.

Structurei

3D structure databases

ProteinModelPortaliB9KD17.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000031446.
KOiK01775.
OMAiVSTYDVG.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9KD17-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAYIKIDRLA YEYNLDLIAS KAGGYEKVIC VFKDNAYGHG AKLLAPIARA
60 70 80 90 100
KGVNFVAVKN EVEAKELENI FDNILILSHH PHGNESEKFI YALNDKNDIK
110 120 130 140 150
KLKKNTKIHL VIDTNMHRNG ILLEEIQEVL QGLKSNNLIL HGVMMHFAGS
160 170 180 190 200
DEVDASYFVQ KQNFQHAKKI IYNLLQKEAK SLVFHSHNSE ALFRANTLED
210 220 230 240 250
DEYCRVGLVQ FGYAYFSKDL RKVLSLWAEK LSQRVLKKGQ SVGYGGMYSA
260 270 280 290 300
KEDIEIATYD LGYADGLLRY DGKKDFFLPN GKKILGKMSM DSFSCENDSE
310 320 330
VICVLNDANV MASFFNTINY EILVKLSPNL KRIVI
Length:335
Mass (Da):38,023
Last modified:March 24, 2009 - v1
Checksum:i9040DA2901EBC030
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000932 Genomic DNA. Translation: ACM64456.1.
RefSeqiWP_012661839.1. NC_012039.1.
YP_002575707.1. NC_012039.1.

Genome annotation databases

EnsemblBacteriaiACM64456; ACM64456; Cla_1134.
GeneIDi7410868.
KEGGicla:Cla_1134.
PATRICi20062749. VBICamLar15090_1119.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000932 Genomic DNA. Translation: ACM64456.1 .
RefSeqi WP_012661839.1. NC_012039.1.
YP_002575707.1. NC_012039.1.

3D structure databases

ProteinModelPortali B9KD17.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 306263.Cla_1134.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACM64456 ; ACM64456 ; Cla_1134 .
GeneIDi 7410868.
KEGGi cla:Cla_1134.
PATRICi 20062749. VBICamLar15090_1119.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000031446.
KOi K01775.
OMAi VSTYDVG.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci CLAR306263:GH7X-1132-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence and analysis of the human pathogen Campylobacter lari."
    Miller W.G., Wang G., Binnewies T.T., Parker C.T.
    Foodborne Pathog. Dis. 5:371-386(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RM2100 / D67 / ATCC BAA-1060Imported.

Entry informationi

Entry nameiB9KD17_CAMLR
AccessioniPrimary (citable) accession number: B9KD17
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: October 29, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3