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B9K4A7 (B9K4A7_AGRVS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length893 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACM39557.1
   Technical termComplete proteome
Plasmid EMBL ACM39557.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9K4A7 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 25FBFD8BB5F51957

FASTA89398,374
        10         20         30         40         50         60 
MPDNLSKYRE KRDFKKTAEP SGEVGVKSSN RRRFVIQKHD ATRLHYDLRI EMDGVFKSWA 

        70         80         90        100        110        120 
VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPKGQYGGG TVMLWDRGYW EPEGNKTAEQ 

       130        140        150        160        170        180 
ALAKGDFKFT LEGERLHGSF VLVRMRGREG EKRTNWLLIK HHDDHAVEEN GAAILEENDT 

       190        200        210        220        230        240 
SVASGRTMEA IASGKGRKPK PFMTQGSVVE ADAVWDSTEG LAADERKAGT KTKAKPTKKA 

       250        260        270        280        290        300 
AAAAKQPNTG MPEFVPPQLC ETFSRPPSAE GWIHEVKFDG YRIQMRVVDG NVTLKTRKGL 

       310        320        330        340        350        360 
DWTAKWPAIA KAASSLPDCI IDGEICALDN HGAPDFAALQ AALSEEKTDD LVFFGFDLLF 

       370        380        390        400        410        420 
EGEEDLREAP LTERKERLSA MLSDAGDDPR LRFVEHFETG GDAVLKSACR LSLEGIVSKK 

       430        440        450        460        470        480 
GDAPYQSGRS DTWTKSKCRA GHEVVIGAYA TTNGAFRSLL VGVYRGDHFV YVGRVGTGYG 

       490        500        510        520        530        540 
AKVVDQILPK LQALEASKSP FTGIGAPKKA AEIVWLKPEL VAEIEFAGWT ADGQVRQAAF 

       550        560        570        580        590        600 
KGLREDKPAK EVEAEKPAEP AEVDTPDPET ARKPAPTPTT SSRLRKGAKV DVMGVLVSSP 

       610        620        630        640        650        660 
DKELWPDALD GEPVTKVDLA HYYEAVGPWL IDHIKGRPCS IIRTPDGIGG EQFFQRHAMQ 

       670        680        690        700        710        720 
GTSNLIEQVK VSGDKQPYLQ IGRVEGLAAI AQIGGAELHP WNCEPYQPEV PGRLVFDLDP 

       730        740        750        760        770        780 
GPDVDFATVV EGAREIRDRL EELGLVSFCK TTGGKGLHVV TPLAVPKGKK LSWDEGKAFA 

       790        800        810        820        830        840 
HDVCLQMARD NPELYLTKMS KAQREGRIFL DYLRNDRTST AVAPLSPRAR PGATVSMPLN 

       850        860        870        880        890 
WAQVKKGLDP KRFTIRTVPG LLKDNTAWQD YCDGQRPLEQ AIKRLEKLMR RAA 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000637 Genomic DNA. Translation: ACM39557.1.
RefSeqYP_002539996.1. NC_011982.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING311402.Avi_8017.

Proteomic databases

PRIDEB9K4A7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM39557; ACM39557; Avi_8017.
GeneID7365147.
KEGGavi:Avi_8017.
PATRIC20821776. VBIAgrVit37146_0593.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAGRTMEAI.
OrthoDBEOG661H49.
ProtClustDBPRK05972.

Enzyme and pathway databases

BioCycAVIT311402:GH2Y-4949-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9K4A7_AGRVS
AccessionPrimary (citable) accession number: B9K4A7
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)