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Protein

Nicotinate phosphoribosyltransferase

Gene

pncB

Organism
Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis (strain S4))
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.UniRule annotation

Catalytic activityi

Nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O = beta-nicotinate D-ribonucleotide + diphosphate + ADP + phosphate.UniRule annotation

Pathwayi: NAD(+) biosynthesis

This protein is involved in step 1 of the subpathway that synthesizes nicotinate D-ribonucleotide from nicotinate.UniRule annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Nicotinate phosphoribosyltransferase (pncB)
This subpathway is part of the pathway NAD(+) biosynthesis, which is itself part of Cofactor biosynthesis.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes nicotinate D-ribonucleotide from nicotinate, the pathway NAD(+) biosynthesis and in Cofactor biosynthesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigase, Transferase
Biological processPyridine nucleotide biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00253; UER00457

Names & Taxonomyi

Protein namesi
Recommended name:
Nicotinate phosphoribosyltransferaseUniRule annotation (EC:6.3.4.21UniRule annotation)
Short name:
NAPRTaseUniRule annotation
Gene namesi
Name:pncBUniRule annotation
Ordered Locus Names:Avi_0250
OrganismiAgrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis (strain S4))
Taxonomic identifieri311402 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacterium
Proteomesi
  • UP000001596 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001468271 – 434Nicotinate phosphoribosyltransferaseAdd BLAST434

Proteomic databases

PRIDEiB9JYR4

Interactioni

Protein-protein interaction databases

STRINGi311402.Avi_0250

Structurei

3D structure databases

ProteinModelPortaliB9JYR4
SMRiB9JYR4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NAPRTase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RH7 Bacteria
COG1488 LUCA
HOGENOMiHOG000284929
KOiK00763
OMAiKLTMQCA
OrthoDBiPOG091H0197

Family and domain databases

HAMAPiMF_00570 NAPRTase, 1 hit
InterProiView protein in InterPro
IPR006406 Nic_PRibTrfase
IPR007229 Nic_PRibTrfase-Fam
IPR036068 Nicotinate_pribotase_like_C
PANTHERiPTHR11098 PTHR11098, 1 hit
PfamiView protein in Pfam
PF04095 NAPRTase, 1 hit
PIRSFiPIRSF000484 NAPRT, 1 hit
SUPFAMiSSF51690 SSF51690, 1 hit
TIGRFAMsiTIGR01514 NAPRTase, 1 hit

Sequencei

Sequence statusi: Complete.

B9JYR4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKADIARRV YNHAWKLDPI VRSLLDTDFY KLLMLQMIWK LYPDVDVTFT
60 70 80 90 100
LINRTTSVRI ADEIDEAELR AQLDHVRTLG ISKKELIWLA GNSFYGRTQI
110 120 130 140 150
FEPEFLAWLS AIRLPAYELS KRDGQYELTF RGRWMETTLW EIPALAIINE
160 170 180 190 200
LRSRAALKSL GYFTLDVIYA RAKAKMWEKV ERLKQLPGLR ISDFGTRRRH
210 220 230 240 250
SFLWQRWCVE ALKEGIGEAF TGTSNVLLAM DSDLEAVGTN AHELPMVAAA
260 270 280 290 300
LAKTDAELAN APYKVLQDWN TLYNGNLLIV LPDAFGTSAF LRDAPPWVAD
310 320 330 340 350
WTGFRPDSAP PIEGGERIIA WWEKMGRDPR QKLLIFSDGL DVDAIIDTYR
360 370 380 390 400
HFEGRVRMSF GWGTNLTNDF IGCAPHDIAG LKPISIVCKI TEANGRPAVK
410 420 430
LSDNPLKATG EPAEVERYLK FFGSEDRVEH AVKV
Length:434
Mass (Da):49,351
Last modified:March 24, 2009 - v1
Checksum:iD5C12CBD04DA626B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000633 Genomic DNA Translation: ACM35160.1
RefSeqiWP_012654690.1, NC_011989.1

Genome annotation databases

EnsemblBacteriaiACM35160; ACM35160; Avi_0250
GeneIDi31493943
KEGGiavi:Avi_0250

Similar proteinsi

Entry informationi

Entry nameiPNCB_AGRVS
AccessioniPrimary (citable) accession number: B9JYR4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: May 23, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

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