B9JVG8 (B9JVG8_AGRVS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ABC transporter nucleotide binding/ATPase protein (Lipoprotein) EMBL ACM36248.1

Gene names

Name:	lolD EMBL ACM36248.1
Ordered Locus Names:	Avi_1741 EMBL ACM36248.1

Organism

Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis (strain S4)) [Complete proteome] [HAMAP] EMBL ACM36248.1

Taxonomic identifier

311402 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium vitis

Protein attributes

Sequence length	229 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner By similarity. SAAS SAAS015854
Subunit structure	The complex is composed of two ATP-binding proteins (LolD) and two transmembrane proteins (LolC and LolE) By similarity. SAAS SAAS015854
Subcellular location	Cell inner membrane; Peripheral membrane protein By similarity SAAS SAAS015854.
Sequence similarities	Belongs to the ABC transporter superfamily. RuleBase RU000684 Contains 1 ABC transporter domain. SAAS SAAS015854

Ontologies

Keywords
Biological process	Transport SAAS SAAS015854
Cellular component	Cell inner membrane SAAS SAAS015854 Cell membrane Membrane
Ligand	ATP-binding RuleBase RU000684 SAAS SAAS015854 Nucleotide-binding
Molecular function	Hydrolase SAAS SAAS015854
PTM	Lipoprotein EMBL ACM36248.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro lipoprotein transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9JVG8 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 654306D094BF1EB2	FASTA	229	24,750
	10 20 30 40 50 60 MANNPVLEIS EVSRTYGEGE TKLSILKGAG LKLYEGETVA LVAPSGTGKS TLLHIAGLLE 70 80 90 100 110 120 HPTDGDVLIG GTRCNELSEE GRTAMRRTSI GFVYQFHHLL PEFSALENIM MPQMIAGLSI 130 140 150 160 170 180 PEASKRAKAL LDYMRIGHRG DHRPAELSGG EQQRVAIARA VANAPLLLLA DEPTGNLDPE 190 200 210 220 TAAYVFSALE ALVRQSGLAA LIATHNHELA RRMDRCVTLQ DGRIVDFDL

References

[1]

"Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria." Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., Du Z., Ewing A. , Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., Zhu H., Wood D.W. J. Bacteriol. 191:2501-2511(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S4 / ATCC BAA-846.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000633 Genomic DNA. Translation: ACM36248.1.
RefSeq	YP_002549254.1. NC_011989.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	311402.Avi_1741.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACM36248; ACM36248; Avi_1741.
GeneID	7386733.
KEGG	avi:Avi_1741.
PATRIC	20827918. VBIAgrVit37146_3626.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1136.
KO	K09810.
OMA	MADQERT.
Enzyme and pathway databases
BioCyc	AVIT311402:GH2Y-1396-MONOMER.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR015854. ABC_transpr_LolD. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
PROSITE	PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. PS51244. LOLD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9JVG8_AGRVS

Accession

Primary (citable) accession number: B9JVG8

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)