Avi_0523

Functionⁱ

GO - Biological processⁱ

phosphorelay signal transduction system Source: InterPro

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Response regulator proteinImported
Gene namesⁱ	Ordered Locus Names:Avi_0523Imported
Organismⁱ	Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis (strain S4))Imported
Taxonomic identifierⁱ	311402 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium vitis
Proteomesⁱ	UP000001596 Componentⁱ: Chromosome 1

Subcellular locationⁱ

GO - Cellular componentⁱ

intracellular Source: GOC

Complete GO annotation...

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	311402.Avi_0523.

STRINGⁱ

311402.Avi_0523.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	B9JQV8.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	1 – 116	Response regulatoryInterPro annotationAdd BLAST		116

Phylogenomic databases

eggNOGⁱ	ENOG4105DW3. Bacteria. COG3437. LUCA.
HOGENOMⁱ	HOG000266481.
KEGG Orthology (KO) More...KOⁱ	K07814.
OMAⁱ	IRMSHFS.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H09F9.

Family and domain databases

InterProⁱ	View protein in InterPro IPR011006. CheY-like_superfamily. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR006675. HDIG_dom. IPR001789. Sig_transdc_resp-reg_receiver.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01966. HD. 1 hit. PF00072. Response_reg. 1 hit.
SMARTⁱ	View protein in SMART SM00471. HDc. 1 hit. SM00448. REC. 1 hit.
SUPFAMⁱ	SSF52172. SSF52172. 1 hit.
TIGRFAMsⁱ	TIGR00277. HDIG. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50110. RESPONSE_REGULATORY. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

B9JQV8-1 [UniParc]FASTA Add to basket

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        10         20         30         40         50
MLVDDNNTNL KLLTRLVKKI DHCEPVAFST PEEVLSALPE LDFDVAIIDY 
        60         70         80         90        100
QMPVYNGVEL YTEIVRFEKY AQVPVVFITA DKDMTTRMAA LNAGAIDFLT 
       110        120        130        140        150
KPVNPIEFQA RIHNIVSLSI ARRQLADQAE WLRREVDRAV GELRQREQEI 
       160        170        180        190        200
IERLTLAAGY KDPDTSRHTL RVAAYAQAIA REMGLPEQFC TDLKLAAPMH 
       210        220        230        240        250
DIGKVAMPDT VLLKQGRLTE SEYRQMQSHA QIGSDILAQS HSSLLQLAAE 
       260        270        280        290        300
IAASHHERWD GQGYPNRLAG DAIPLSGRIV CIADNFDALT TERPYKPAWS 
       310        320        330        340        350
YERTVEHVLA RAGSQFDPAC VAAFERALPA IHEIIEADRR EQAEEAARKA 

AALPLDKIA

Length:359

Mass (Da):40,163

Last modified:March 24, 2009 - v1

Checksum:ⁱEDC025170DF43638

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000633 Genomic DNA. Translation: ACM35371.1.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

CP000633 Genomic DNA. Translation: ACM35371.1.

Genome annotation databases

EnsemblBacteriaⁱ	ACM35371; ACM35371; Avi_0523.
KEGGⁱ	avi:Avi_0523.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000633 Genomic DNA. Translation: ACM35371.1.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

CP000633 Genomic DNA. Translation: ACM35371.1.

3D structure databases

ProteinModelPortalⁱ	B9JQV8.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	311402.Avi_0523.

STRINGⁱ

311402.Avi_0523.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ACM35371; ACM35371; Avi_0523.
KEGGⁱ	avi:Avi_0523.

Phylogenomic databases

eggNOGⁱ	ENOG4105DW3. Bacteria. COG3437. LUCA.
HOGENOMⁱ	HOG000266481.
KEGG Orthology (KO) More...KOⁱ	K07814.
OMAⁱ	IRMSHFS.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H09F9.

Family and domain databases

InterProⁱ	View protein in InterPro IPR011006. CheY-like_superfamily. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR006675. HDIG_dom. IPR001789. Sig_transdc_resp-reg_receiver.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01966. HD. 1 hit. PF00072. Response_reg. 1 hit.
SMARTⁱ	View protein in SMART SM00471. HDc. 1 hit. SM00448. REC. 1 hit.
SUPFAMⁱ	SSF52172. SSF52172. 1 hit.
TIGRFAMsⁱ	TIGR00277. HDIG. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50110. RESPONSE_REGULATORY. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	B9JQV8_AGRVS
Accessionⁱ	B9JQV8Primary (citable) accession number: B9JQV8
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	March 24, 2009
	Last sequence update:	March 24, 2009
	Last modified:	June 7, 2017
	This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - B9JQV8 (B9JQV8_AGRVS)

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Response regulator protein

Select a section on the left to see content.

Functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - B9JQV8 (B9JQV8_AGRVS)

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Response regulator protein

Avi_0523

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ