B9JNP6 (B9JNP6_AGRRK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cell-wall lytic enzyme EMBL ACM29177.1

Gene names

Name:	lysM EMBL ACM29177.1
Ordered Locus Names:	Arad_7739

Organism

Agrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP] EMBL ACM29177.1

Taxonomic identifier

311403 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	343 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9JNP6 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 37F6E968A87788A9	FASTA	343	38,112
	10 20 30 40 50 60 MRISAVSAIL LASLALSGCS TSSGAGDLAA GLPSAETTNS IARSDDPVPS VSVGEVIAQA 70 80 90 100 110 120 EQQQGLYAPS APGPRPQAFL SVAKTEGTPL PAERPVALLM PANPRISSIA PLARSPIYAR 130 140 150 160 170 180 RFRDAKPINF GVSSPRKLAV HGVDVSRWQG DIDWQTLQTQ GANFVYIKAT DGGDHLDPMF 190 200 210 220 230 240 RQNWRKAKEA GLKRGAYHFF YWCRTAGEQA DWFIRNVPKE AGALPPVIDV EWNGESSCKQ 250 260 270 280 290 300 RVSRERVLEK MQTFMDKLER YYGQRPIIYT APDFYRDNLR GAFLEHPFWL RAVAEHPSKV 310 320 330 340 YPGRKWLFWQ YSGSGLSHGV EGRIDLNAFH GSEDEWHKWV ATN

References

[1]

"Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria." Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., Du Z., Ewing A. , Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., Zhu H., Wood D.W. J. Bacteriol. 191:2501-2511(2009) [PubMed: 19251847] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000629 Genomic DNA. Translation: ACM29177.1.
RefSeq	YP_002540772.1. NC_011983.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B9JNP6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7367553.
GenomeReviews	Gene locus Arad_7739 in contig CP000629_GR.
KEGG	ara:Arad_7739.
PATRIC	20796946. VBIAgrRad129173_0600.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	NGESSCK.
ProtClustDB	CLSK862917.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR018077. Glyco_hydro_fam25_subgr. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SMART	SM00641. Glyco_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9JNP6_AGRRK

Accession

Primary (citable) accession number: B9JNP6

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)