B9JFI2 (B9JFI2_AGRRK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
L-serine ammonia-lyase EMBL ACM26672.1

Gene names

Name:	sdaA EMBL ACM26672.1
Ordered Locus Names:	Arad_2497 EMBL ACM26672.1

Organism

Agrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP] EMBL ACM26672.1

Taxonomic identifier

311403 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium tumefaciens complex › Rhizobium radiobacter

Protein attributes

Sequence length	468 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACM26672.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gluconeogenesis Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro L-serine ammonia-lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9JFI2 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: DF12EC9987ADF6BC	FASTA	468	50,288
	10 20 30 40 50 60 MFLSVFDVFK IGVGPSSSHT MGPMSAANRF LDLVLSSEWP RPSSNVHVAS IKVSLHGSLA 70 80 90 100 110 120 HTGIGHGTGR AVILGLMGER PDQVDPDRMD AVIDEVERSG RITPPGHPAY QFQPKTDLIF 130 140 150 160 170 180 DKKVPLPGHA NGMSFSAFDK DERLLVKRIY YSVGGGFVVT DTELEQMRAD KKKASSGERI 190 200 210 220 230 240 PFPFSTAKQM LDMAERSGLS IAQMKRANEE TRMSSDELDS GLDRIWTAMS SCIDRGLKVD 250 260 270 280 290 300 GIMPGGLKVR RRARSIHDKL QEEWRSNRIN PLLANDWLSV YAMAVNEENA AGGRVVTAPT 310 320 330 340 350 360 NGAAGVIPAT IRYYQHFHED WDQDGIRNYL LTAAAVGGII KHNASISGAE VGCQGEVGSA 370 380 390 400 410 420 AAMAAAGLAA VMGASPEQIE NAAEIALEHH LGMTCDPVAG LVQVPCIERN ALGAVKAVTA 430 440 450 460 ASLALKGDGQ HFVPLDACIE TMRQTGYDMS EKYKETSTGG LAVNVVEC

References

[1]

"Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria." Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., Du Z., Ewing A. , Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., Zhu H., Wood D.W. J. Bacteriol. 191:2501-2511(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K84 / ATCC BAA-868.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000628 Genomic DNA. Translation: ACM26672.1.
RefSeq	YP_002544600.1. NC_011985.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	311403.Arad_2497.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACM26672; ACM26672; Arad_2497.
GeneID	7370437.
KEGG	ara:Arad_2497.
PATRIC	20804662. VBIAgrRad129173_4415.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1760.
HOGENOM	HOG000036732.
KO	K01752.
OMA	HRSAQEL.
ProtClustDB	CLSK863049.
Enzyme and pathway databases
BioCyc	ARAD311403:GHU8-2469-MONOMER.
Family and domain databases
InterPro	IPR004644. Fe-S_L-Ser_mono. IPR005130. Ser_deHydtase-like_asu. IPR005131. Ser_deHydtase_bsu. [Graphical view]
Pfam	PF03313. SDH_alpha. 1 hit. PF03315. SDH_beta. 1 hit. [Graphical view]
TIGRFAMs	TIGR00720. sda_mono. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9JFI2_AGRRK

Accession

Primary (citable) accession number: B9JFI2

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)