B9JFF3 (B9JFF3_AGRRK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Triosephosphate isomerase RuleBase RU000517
EC=5.3.1.1 RuleBase RU000517

Gene names

Name:	tpiA EMBL ACM26643.1
Ordered Locus Names:	Arad_2459

Organism

Agrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP]

Taxonomic identifier

311403 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	242 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-glyceraldehyde 3-phosphate = glycerone phosphate. RuleBase RU000517
Pathway	Carbohydrate biosynthesis; gluconeogenesis. RuleBase RU003527 Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. RuleBase RU003527
Sequence similarities	Belongs to the triosephosphate isomerase family. RuleBase RU004162

Ontologies

Keywords
Biological process	Gluconeogenesis RuleBase RU003527 Glycolysis RuleBase RU003527 Pentose shunt RuleBase RU003527
Molecular function	Isomerase RuleBase RU000517 EMBL ACM26643.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gluconeogenesis Inferred from electronic annotation. Source: UniProtKB-KW glycolysis Inferred from electronic annotation. Source: UniProtKB-KW pentose-phosphate shunt Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	triose-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9JFF3 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 3FAA8E6D2EA1CD3D	FASTA	242	25,513
	10 20 30 40 50 60 MNGTRASLDQ IKAIAEGVKA PLSERIDTLL CPPATLLYVA TALCDDSPLA IGAQDCHQLV 70 80 90 100 110 120 SGAHTGDISA EMIADCFGTH VIVGHSERRR NHVESDALVR AKAEAALNAD LIAIVCIGET 130 140 150 160 170 180 AEERDNAQTL DVLKRQLAGS VPDGSVSETT VIAYEPVWAI GTGKVPTRAD VEEAHAFIRG 190 200 210 220 230 240 ELVERFGEDG KKFRLLYGGS VSGANAADLL SVANVNGLLV GGQSLKAVDF LAIYGAFERQ FA

References

[1]

"Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria." Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., Du Z., Ewing A. , Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., Zhu H., Wood D.W. J. Bacteriol. 191:2501-2511(2009) [PubMed: 19251847] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000628 Genomic DNA. Translation: ACM26643.1.
RefSeq	YP_002544571.1. NC_011985.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B9JFF3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7372073.
GenomeReviews	Gene locus Arad_2459 in contig CP000628_GR.
KEGG	ara:Arad_2459.
PATRIC	20804604. VBIAgrRad129173_4386.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	MISSEMS.
ProtClustDB	PRK00042.
Family and domain databases
HAMAP	MF_00147_B. TIM_B. [Tree]
InterPro	IPR013785. Aldolase_TIM. IPR022896. TrioseP_Isoase_bac/euk. IPR000652. Triosephosphate_isomerase. IPR020861. Triosephosphate_isomerase_AS. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01803.
PANTHER	PTHR21139. Triophos_ismrse. 1 hit.
Pfam	PF00121. TIM. 1 hit. [Graphical view]
SUPFAM	SSF51351. Triophos_ismrse. 1 hit.
TIGRFAMs	TIGR00419. Tim. 1 hit.
PROSITE	PS00171. TIM_1. 1 hit. PS51440. TIM_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9JFF3_AGRRK

Accession

Primary (citable) accession number: B9JFF3

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)