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B9JEY6 (B9JEY6_AGRRK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056 EMBL ACM26477.1
Ordered Locus Names:Arad_2242
OrganismAgrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP]
Taxonomic identifier311403 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length279 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
B9JEY6 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 5D46B57A75F15909

FASTA27929,711
        10         20         30         40         50         60 
MSTNSEVIVG EGASKVLFSN TAKLSLIAGP CQMESRDHAF MVAGVLKELC GKLGIGLVYK 

        70         80         90        100        110        120 
SSYDKANRTS LSGKRGIGLE KAMEVFADLK KEYGFPVLSD IHTEEQCAVV AKTVDILQIP 

       130        140        150        160        170        180 
AFLSRQTDLL VAAAKTGRVV NVKKGQFLAP WDMKNVLAKL NDSGNLNIML CERGASFGYN 

       190        200        210        220        230        240 
TLVSDMRSLP IMAAMGAPVI FDATHSVQQP GGQGGSTGGD RRFVETLARA AVAVGVAGVF 

       250        260        270 
VETHEDPDNA PSDGPNMVYL KDMPQLLEKL LAFDAIAKA

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000628 Genomic DNA. Translation: ACM26477.1.
RefSeqYP_002544404.1. NC_011985.1.

3D structure databases

ProteinModelPortalB9JEY6.
ModBaseSearch...

Protein-protein interaction databases

STRINGB9JEY6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7369173.
GenomeReviewsGene locus Arad_2242 in contig CP000628_GR.
KEGGara:Arad_2242.
PATRIC20804260. VBIAgrRad129173_4216.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAESRDHAF.
ProtClustDBPRK05198.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9JEY6_AGRRK
AccessionPrimary (citable) accession number: B9JEY6
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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