B9JDI0 (B9JDI0_AGRRK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysyl-tRNA synthetase protein EMBL ACM28309.1

Gene names

Name:	genX EMBL ACM28309.1
Ordered Locus Names:	Arad_4638

Organism

Agrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP]

Taxonomic identifier

311403 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	354 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL ACM28309.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9JDI0 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: EB1E4A7A38F4B466	FASTA	354	39,320
	10 20 30 40 50 60 MEPTSSRASP WWTRSVHADR RPFLLGRNAI QAALRGFFAR NDFIEVDTST LQVSPGNEAH 70 80 90 100 110 120 LHAFATEALT TDGQAAPFYL HTSPEFACKK LLAAGEERIA CFAHVYRNRE RGPLHHPEFT 130 140 150 160 170 180 MLEWYRAGET YETLMNDCAV LLALAAETVG AKKLTYRGAE TDPFLAPERI SVAAAFERHA 190 200 210 220 230 240 GIDLLRSVGP DGSTDREHLA AEMRRVGMRV AADDHWADLF SRVLVEKVEP YLGFGRATIL 250 260 270 280 290 300 DEYPVSEAAL ARPSAADHRV AERFELYACG VELANAFGEL TNAQEQRRRF EIEMAEKARI 310 320 330 340 350 YGETYPLDED FLQALAVTPE ASGIALGFDR LVMLATGASR IEQVLWAPVS EFGS

References

[1]

"Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria." Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., Du Z., Ewing A. , Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., Zhu H., Wood D.W. J. Bacteriol. 191:2501-2511(2009) [PubMed: 19251847] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000628 Genomic DNA. Translation: ACM28309.1.
RefSeq	YP_002546242.1. NC_011985.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B9JDI0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7370366.
GenomeReviews	Gene locus Arad_4638 in contig CP000628_GR.
KEGG	ara:Arad_4638.
PATRIC	20808116. VBIAgrRad129173_6124.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	MPEASGI.
ProtClustDB	CLSK2393300.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9JDI0_AGRRK

Accession

Primary (citable) accession number: B9JDI0

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)