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B9JAL9

- EX7S_AGRRK

UniProt

B9JAL9 - EX7S_AGRRK

Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotation

    Catalytic activityi

    Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

    GO - Molecular functioni

    1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Exonuclease, Hydrolase, Nuclease

    Enzyme and pathway databases

    BioCyciARAD311403:GHU8-928-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
    Alternative name(s):
    Exodeoxyribonuclease VII small subunitUniRule annotation
    Short name:
    Exonuclease VII small subunitUniRule annotation
    Gene namesi
    Name:xseBUniRule annotation
    Ordered Locus Names:Arad_1202
    OrganismiAgrobacterium radiobacter (strain K84 / ATCC BAA-868)
    Taxonomic identifieri311403 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
    ProteomesiUP000001600: Chromosome 1

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. exodeoxyribonuclease VII complex Source: InterPro

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8383Exodeoxyribonuclease 7 small subunitPRO_1000200239Add
    BLAST

    Interactioni

    Subunit structurei

    Heterooligomer composed of large and small subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi311403.Arad_1202.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the XseB family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1722.
    HOGENOMiHOG000228798.
    KOiK03602.
    OMAiMTENANT.
    OrthoDBiEOG69KV31.

    Family and domain databases

    Gene3Di1.10.287.1040. 1 hit.
    HAMAPiMF_00337. Exonuc_7_S.
    InterProiIPR003761. Exonuc_VII_S.
    [Graphical view]
    PfamiPF02609. Exonuc_VII_S. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomiPD028235. Exonuc_VII_S. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR01280. xseB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9JAL9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSESAKLDVS DYSFEKAVAE LESIVARLER GDVALDESIA IYERGEALKK   50
    HCETLLSAAE NRIEKIRLDR AGKPQGTEPL DGQ 83
    Length:83
    Mass (Da):9,162
    Last modified:March 24, 2009 - v1
    Checksum:iEE5D9D909B581AB2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000628 Genomic DNA. Translation: ACM25702.1.
    RefSeqiYP_002543628.1. NC_011985.1.

    Genome annotation databases

    EnsemblBacteriaiACM25702; ACM25702; Arad_1202.
    GeneIDi7371205.
    KEGGiara:Arad_1202.
    PATRICi20802592. VBIAgrRad129173_3403.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000628 Genomic DNA. Translation: ACM25702.1 .
    RefSeqi YP_002543628.1. NC_011985.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 311403.Arad_1202.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACM25702 ; ACM25702 ; Arad_1202 .
    GeneIDi 7371205.
    KEGGi ara:Arad_1202.
    PATRICi 20802592. VBIAgrRad129173_3403.

    Phylogenomic databases

    eggNOGi COG1722.
    HOGENOMi HOG000228798.
    KOi K03602.
    OMAi MTENANT.
    OrthoDBi EOG69KV31.

    Enzyme and pathway databases

    BioCyci ARAD311403:GHU8-928-MONOMER.

    Family and domain databases

    Gene3Di 1.10.287.1040. 1 hit.
    HAMAPi MF_00337. Exonuc_7_S.
    InterProi IPR003761. Exonuc_VII_S.
    [Graphical view ]
    Pfami PF02609. Exonuc_VII_S. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomi PD028235. Exonuc_VII_S. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR01280. xseB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K84 / ATCC BAA-868.

    Entry informationi

    Entry nameiEX7S_AGRRK
    AccessioniPrimary (citable) accession number: B9JAL9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3