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B9JAL9 (EX7S_AGRRK) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Exodeoxyribonuclease 7 small subunit

EC=3.1.11.6
Alternative name(s):
Exodeoxyribonuclease VII small subunit
Short name=Exonuclease VII small subunit
Gene names
Name:xseB
Ordered Locus Names:Arad_1202
OrganismAgrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP]
Taxonomic identifier311403 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

Protein attributes

Sequence length83 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. HAMAP-Rule MF_00337

Catalytic activity

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00337

Subunit structure

Heterooligomer composed of large and small subunits By similarity.

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00337.

Sequence similarities

Belongs to the XseB family.

Ontologies

Keywords
   Cellular componentCytoplasm
   Molecular functionExonuclease
Hydrolase
Nuclease
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

exodeoxyribonuclease VII complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexodeoxyribonuclease VII activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8383Exodeoxyribonuclease 7 small subunit HAMAP-Rule MF_00337
PRO_1000200239

Sequences

Sequence LengthMass (Da)Tools
B9JAL9 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: EE5D9D909B581AB2

FASTA839,162
        10         20         30         40         50         60 
MSESAKLDVS DYSFEKAVAE LESIVARLER GDVALDESIA IYERGEALKK HCETLLSAAE 

        70         80 
NRIEKIRLDR AGKPQGTEPL DGQ 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000628 Genomic DNA. Translation: ACM25702.1.
RefSeqYP_002543628.1. NC_011985.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING311403.Arad_1202.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM25702; ACM25702; Arad_1202.
GeneID7371205.
KEGGara:Arad_1202.
PATRIC20802592. VBIAgrRad129173_3403.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1722.
HOGENOMHOG000228798.
KOK03602.
OMAMTENANT.
OrthoDBEOG69KV31.

Enzyme and pathway databases

BioCycARAD311403:GHU8-928-MONOMER.

Family and domain databases

Gene3D1.10.287.1040. 1 hit.
HAMAPMF_00337. Exonuc_7_S.
InterProIPR003761. Exonuc_VII_S.
[Graphical view]
PfamPF02609. Exonuc_VII_S. 1 hit.
[Graphical view]
PIRSFPIRSF006488. Exonuc_VII_S. 1 hit.
ProDomPD028235. Exonuc_VII_S. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR01280. xseB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameEX7S_AGRRK
AccessionPrimary (citable) accession number: B9JAL9
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families