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B9JAA2 (B9JAA2_AGRRK) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
1,4-alpha-glucan branching enzyme GlgB HAMAP MF_00685
EC=2.4.1.18 HAMAP MF_00685
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase HAMAP MF_00685
Alpha-(1->4)-glucan branching enzyme HAMAP MF_00685
Glycogen branching enzyme HAMAP MF_00685
Gene names
Name:glgB HAMAP MF_00685 EMBL ACM27717.1
Ordered Locus Names:Arad_3869
OrganismAgrobacterium radiobacter (strain K84 / ATCC BAA-868) [Complete proteome] [HAMAP]
Taxonomic identifier311403 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length735 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity. HAMAP MF_00685

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. HAMAP MF_00685 SAAS SAAS006407

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00685 SAAS SAAS006407

Subunit structure

Monomer By similarity. HAMAP MF_00685

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. HAMAP MF_00685

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site4181Nucleophile By similarity HAMAP MF_00685
Active site4711Proton donor By similarity HAMAP MF_00685

Sequences

Sequence LengthMass (Da)Tools
B9JAA2 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 6580D816314E604C

FASTA73583,331
        10         20         30         40         50         60 
MKKPKRPVDG IALRDISADE IAAILAGTHS DPFAVLGVHK TEDGFIARCF ILGAEAVTAM 

        70         80         90        100        110        120 
ALDGTVIGEL DCLDPAGFFA GNVKITKLQP VRYRARRGDV EWAVTDPYSF GPVLGPMDDY 

       130        140        150        160        170        180 
FLREGTHLRL FDKMGAHPIK HEGVQGFHFA VWAPNAQRVS VVGDFNGWDG RRHVMRFRSD 

       190        200        210        220        230        240 
AGIWEIFAPD VPAGIAYKFE IRGHDGVLLP LKADPFARRS ELRPKTASVT ANEMTQVWED 

       250        260        270        280        290        300 
TAHREHWASV DQRRQPISIY EVHAGSWQRR DDGSMLSWDE LASRLIPYCV DMGFTHIELM 

       310        320        330        340        350        360 
PITEHPYDPS WGYQTTGLYA PTARFGEPEG FARFVNGCHK VGIGVLLDWV PAHFPTDEHG 

       370        380        390        400        410        420 
LRRFDGTALY EHEDPRKGFH PDWNTAIYNF GRTEVLAYLQ NNALYWAEKF HLDGVRVDAV 

       430        440        450        460        470        480 
ASMLYLDYSR KHGEWIPNEY GGNENLEAVR FLQSMNSRLY GAHPGVMTIA EESTSWPKVS 

       490        500        510        520        530        540 
QPVHEGGLGF GFKWNMGFMH DTLSYLARDH VHRKYHHNEL TFGLIYAFSE NFVLPLSHDE 

       550        560        570        580        590        600 
VVHGKGSLIA KMAGDDWQKF ANLRAYYAFM WGYPGKKLLF MGQEFAQWSE WSEERALDWN 

       610        620        630        640        650        660 
LLQYRMHEGM RRLVRDLNFT YRSKPALHAR DCEGEGFEWL IVDDFENSVF AWLRKAPGEK 

       670        680        690        700        710        720 
PVAVITNFTP VYRENYALRL PAEGRWREIL NTDADIYGGS GKGNGGRVQA VSAGGSIHAT 

       730 
ITLPPLATIM LEPEF

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000628 Genomic DNA. Translation: ACM27717.1.
RefSeqYP_002545648.1. NC_011985.1.

3D structure databases

ProteinModelPortalB9JAA2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB9JAA2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7369933.
GenomeReviewsGene locus Arad_3869 in contig CP000628_GR.
KEGGara:Arad_3869.
PATRIC20806872. VBIAgrRad129173_5513.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAWEIFAPD.
ProtClustDBPRK05402.

Family and domain databases

HAMAPMF_00685. GlgB.
[Tree]
InterProIPR006407. 1-4-A-glucan_branch_enz.
IPR006048. A-amylase_b_C.
IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KOK00700.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PTHR10357:SF13. PTHR10357:SF13. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 2 hits.
TIGRFAMsTIGR01515. Branching_enzym. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9JAA2_AGRRK
AccessionPrimary (citable) accession number: B9JAA2
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info