Skip Header

Contribute Send feedback
Read comments (?) or add your own

B9J1W2 (B9J1W2_BACCQ) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Lysine--tRNA ligase HAMAP-Rule MF_00177
EC=6.1.1.6 HAMAP-Rule MF_00177
Alternative name(s):
Lysyl-tRNA synthetase HAMAP-Rule MF_00177
Gene names
Name:lysS HAMAP-Rule MF_00177 EMBL ACM12898.1
Ordered Locus Names:BCQ_2470 EMBL ACM12898.1
OrganismBacillus cereus (strain Q1) [Complete proteome] [HAMAP] EMBL ACM12898.1
Taxonomic identifier361100 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus cereus group ›

Protein attributes

Sequence length517 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys). HAMAP-Rule MF_00177

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00177.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00177 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif29 – 379"HIGH" region By similarity HAMAP-Rule MF_00177
Motif281 – 2855"KMSKS" region By similarity HAMAP-Rule MF_00177

Sequences

Sequence LengthMass (Da)Tools
B9J1W2 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 59E9C08FB405B6B9

FASTA51760,814
        10         20         30         40         50         60 
MHWAYEVAHE LIRKHPNKET FVCASGISPS GAVHIGNFRE IVTTYFVVRA LQDLGKKTRF 

        70         80         90        100        110        120 
IFSWDDYDRF RKVPKNVDSS FVKYIGMPYC DIPDPYGCHN SYAEHFEKEF EESLQVFGIE 

       130        140        150        160        170        180 
VEFIYQHAEY RSGRYNKNIL EALYKRKEIY DILMSFKTGE CSEEEREGFY PVTLYCEKCG 

       190        200        210        220        230        240 
KDATTITHFD EVLKTVRYEC ECGNQTELSV LNTNEMKLNW KIDWPMRWMI EDVVFEPGGR 

       250        260        270        280        290        300 
DHSSETGSYN VSKEIARKIF NREAPHYIAY DFIGTKGHHE KMSSSSGNSI TPSELLKVYL 

       310        320        330        340        350        360 
PEVILFMFAK YRPDAAFHIG LDEDVIRNYT EYERLKDSYE NKTLKNEDLF DAIKLSRVDS 

       370        380        390        400        410        420 
GFKEYPKFNQ VAGILPLLNF DSSILQGTLD EIDRSYALDA MIAICNRAEY WIRNFQSEKL 

       430        440        450        460        470        480 
IAVNQERNTE FYNTLNERQK ERLVEVCNIF RSNKDYSNLM EQLYALYHHE NKKIMKENQK 

       490        500        510 
QLFIIIYRLI MNQSSGPRIP LLIHVVGIEK FIELLDF

« Hide

References

[1]"Complete genome sequence of the extremophilic Bacillus cereus strain Q1 with industrial applications."
Xiong Z., Jiang Y., Qi D., Lu H., Yang F., Yang J., Chen L., Sun L., Xu X., Xue Y., Zhu Y., Jin Q.
J. Bacteriol. 191:1120-1121(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Q1 EMBL ACM12898.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000227 Genomic DNA. Translation: ACM12898.1.
RefSeqYP_002530187.1. NC_011969.1.

3D structure databases

ProteinModelPortalB9J1W2.
ModBaseSearch...

Protein-protein interaction databases

STRING361100.BCQ_2470.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACM12898; ACM12898; BCQ_2470.
GeneID7374612.
KEGGbcq:BCQ_2470.
PATRIC18912550. VBIBacCer120424_2443.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1384.
HOGENOMHOG000226938.
KOK04566.
OMAFIFSWDD.
ProtClustDBPRK00750.

Enzyme and pathway databases

BioCycBCER361100:GJ7M-2457-MONOMER.

Family and domain databases

Gene3D1.10.10.350. 1 hit.
2.30.30.300. 1 hit.
3.40.50.620. 2 hits.
HAMAPMF_00177. Lys_tRNA_synth_class1.
InterProIPR008925. aa-tRNA-synth_I_codon-bd.
IPR020751. aa-tRNA-synth_I_codon-bd_sub2.
IPR001412. aa-tRNA-synth_I_CS.
IPR002904. Lys-tRNA-ligase.
IPR023386. Lys-tRNA-ligase_insertion.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamPF01921. tRNA-synt_1f. 1 hit.
[Graphical view]
SUPFAMSSF48163. tRNA-synt_bind. 1 hit.
TIGRFAMsTIGR00467. lysS_arch. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9J1W2_BACCQ
AccessionPrimary (citable) accession number: B9J1W2
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info