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Protein
Submitted name:

DNA polymerase III, delta prime subunit

Gene

holB

Organism
Bacillus cereus (strain Q1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA-directed DNA polymerase activity Source: InterPro

GO - Biological processi

  1. DNA replication Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBCER361100:GJ7M-36-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, delta prime subunitImported
Gene namesi
Name:holBImported
Ordered Locus Names:BCQ_0038Imported
OrganismiBacillus cereus (strain Q1)Imported
Taxonomic identifieri361100 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
ProteomesiUP000000441: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi361100.BCQ_0038.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192593.
KOiK02341.
OMAiRIESGNH.
OrthoDBiEOG661HCB.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.

Sequencei

Sequence statusi: Complete.

B9IZB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLMNSIAKER ISHAYLLEGG KGTGKFATAI QMAKSFLCSQ RNGVEPCHVC
60 70 80 90 100
TNCKRIDSGN HPNLHIVKPD GLSIKKQQIH DLQEEFSKTG LEANKKVYVI
110 120 130 140 150
EHADRMTANA ANTLLKFLEE PSSDTTAILL TEQSHQILNT ILSRCQVVTF
160 170 180 190 200
RPLPTESLIR RLQDEGITAS LSTLAAQLTN SFDEALALCS DEWFAQARAL
210 220 230 240 250
VIKLCEALEK DKASIFFVQE KWGKHFREKE QLQQGLDMLL LIYKDLLYVQ
260 270 280 290 300
LGEEDRLVFH EQKEMFESFS YAQKRIVSAL FNILEAKNRI NANVNAQLVF
310
EQLVLRLQEG
Length:310
Mass (Da):35,140
Last modified:March 24, 2009 - v1
Checksum:i92B24214A0F3BCBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000227 Genomic DNA. Translation: ACM10558.1.
RefSeqiWP_012644141.1. NC_011969.1.
YP_002527850.1. NC_011969.1.

Genome annotation databases

EnsemblBacteriaiACM10558; ACM10558; BCQ_0038.
GeneIDi7373103.
KEGGibcq:BCQ_0038.
PATRICi18907531. VBIBacCer120424_0028.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000227 Genomic DNA. Translation: ACM10558.1.
RefSeqiWP_012644141.1. NC_011969.1.
YP_002527850.1. NC_011969.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi361100.BCQ_0038.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACM10558; ACM10558; BCQ_0038.
GeneIDi7373103.
KEGGibcq:BCQ_0038.
PATRICi18907531. VBIBacCer120424_0028.

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192593.
KOiK02341.
OMAiRIESGNH.
OrthoDBiEOG661HCB.

Enzyme and pathway databases

BioCyciBCER361100:GJ7M-36-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the extremophilic Bacillus cereus strain Q1 with industrial applications."
    Xiong Z., Jiang Y., Qi D., Lu H., Yang F., Yang J., Chen L., Sun L., Xu X., Xue Y., Zhu Y., Jin Q.
    J. Bacteriol. 191:1120-1121(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Q1Imported.

Entry informationi

Entry nameiB9IZB4_BACCQ
AccessioniPrimary (citable) accession number: B9IZB4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: March 4, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.