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B9IQH9 (B9IQH9_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE99930.1
Gene names
ORF Names:POPTRDRAFT_809657 EMBL EEE99930.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Golgi apparatus › Golgi stack membrane; Single-pass type II membrane protein By similarity RuleBase RU003832.

Sequence similarities

Belongs to the glycosyltransferase 10 family. RuleBase RU003832

Ontologies

Keywords
   Cellular componentGolgi apparatus RuleBase RU003832
Membrane
   DomainTransmembrane RuleBase RU003832
   Molecular functionGlycosyltransferase RuleBase RU003832
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processprotein glycosylation

Inferred from electronic annotation. Source: InterPro

   Cellular componentGolgi cisterna membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

integral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionfucosyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9IQH9 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: EA682F0E9EE4A2F8

FASTA40945,902
        10         20         30         40         50         60 
MQLKPLNTYT ITLMLFFTII ILFFSGFLEF PSIATSITSP IKDPNFPVKT TPDPFTDLFV 

        70         80         90        100        110        120 
AFKKWDSQVG CVQFREKHKN LGSFGSKGTN GSASLQVVDG DVGCSELKME HVNVLVKGWT 

       130        140        150        160        170        180 
WIPGNLDNLY SCHCGLSCLW TKSSVLADKP DALLFETTTP PLQRRNGDPL RVYMDLEAGR 

       190        200        210        220        230        240 
KRSGREDLFI SYHAEDDVQS TYAGALFHNG RNYHVSRRKD NDTLVYWSSS RCLADRNRLA 

       250        260        270        280        290        300 
KSLLSLLPHH SFGKCLNNVG GLDMALSFYP ECANDASLKP KWWDHLHCAM SHYKFVLAIE 

       310        320        330        340        350        360 
NTWTESYVTE KLFYALDSGS VPIYFGAPNV LDFVPPHSII DGNKFNSMEE LASYVKDLAN 

       370        380        390        400 
DPVAYAEYHA WRRCGVLGNY GKTRAASLDT LPCRLCEAVS RKGGRNARA

« Hide

References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000355 Genomic DNA. Translation: EEE99930.1.
RefSeqXP_002325549.1. XM_002325513.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7467417.
KEGGpop:POPTR_809657.

Phylogenomic databases

GeneTreeEPGT00070000030487.
OMALLFETTT.
ProtClustDBCLSN2680641.

Family and domain databases

InterProIPR017177. Alpha-1_3/4-FUT_pln.
IPR001503. Glyco_trans_10.
[Graphical view]
KOK14412.
PANTHERPTHR11929. Glyco_trans_10. 1 hit.
PfamPF00852. Glyco_transf_10. 1 hit.
[Graphical view]
PIRSFPIRSF037334. Alpha1_3/4FUT_pln. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9IQH9_POPTR
AccessionPrimary (citable) accession number: B9IQH9
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info