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B9IPJ5 (B9IPJ5_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE99763.1
Gene names
ORF Names:POPTRDRAFT_836035 EMBL EEE99763.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9IPJ5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: AD58CF8F5BC9F0F1

FASTA50557,815
        10         20         30         40         50         60 
MANKQLHILS SRSRSPILLF TICLFAFSLL FLLFSLSTRH PSASPYPNTN PNLSLKPETS 

        70         80         90        100        110        120 
FVASLEHFLD HKYPTSSSSS SPFPTVSEED VSRFDDQVFS KERDRFYREP YYPLDLPIRV 

       130        140        150        160        170        180 
YLYEMPSKFT YDLLWLFRNT YRNTDNLTSN GSPVHRLIEQ HSVDYWLWAD LIAPESERLL 

       190        200        210        220        230        240 
KSVVRVERQE DADLFYVPFF TTISFFLLEK QQCKALYREA LKWVTDQPAW KRSEGRNHIF 

       250        260        270        280        290        300 
PIHHPWSFKS VRRYVKNAIW LLPDMDSTGN WYKPGQVFLE KDLILPYVPN VNLCDTKCIS 

       310        320        330        340        350        360 
ESESKRSTLL YFRGRLKRNA GGKIRAKLVA ELSGAEGVFI EEGTAGEGGK AAAQIGMRKS 

       370        380        390        400        410        420 
IFCLSPAGDT PSSARLFDAI VSGCIPVVVS DELELPFEGI LDYRKIALFV SSSDAVQPGW 

       430        440        450        460        470        480 
LLKFLKGISL AQIRGMQRNL AKYSRHFIYS SPALPLGPED LVWRMMAGKL VNIRLHTRRS 

       490        500 
QRVVKESRSV CACDCKRANF TVLVL

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000355 Genomic DNA. Translation: EEE99763.1.
RefSeqXP_002325382.1. XM_002325346.1.
UniGenePth.8333.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7453580.
KEGGpop:POPTR_836035.

Phylogenomic databases

GeneTreeEPGT00070000031305.
OMAYREALKW.
ProtClustDBCLSN2686306.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9IPJ5_POPTR
AccessionPrimary (citable) accession number: B9IPJ5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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