B9IKZ6 (B9IKZ6_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEF03438.1

Gene names

ORF Names:

POPTRDRAFT_809130 EMBL EEF03438.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	335 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9IKZ6 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: A6BAD60B3F0338C8	FASTA	335	38,912
	10 20 30 40 50 60 MEKRFRVWTY REGEQPLFHR GPMNDIYSIE GQIIDELDSG KSPFSAKNPD EALAFFIPVS 70 80 90 100 110 120 IASILHFIYR PYVTYSRKQI QDIAEDYIGL ISSKYPYWNR SSGADHFMIS CHDWAPDVSA 130 140 150 160 170 180 ANPDLYRNFI RVLCNANSSE GFKPARDVSL PEFKLPRGKL EPEHILQPCD NNRSILAFFA 190 200 210 220 230 240 GGSHGSVRKI LFKHWKEKDN DIQVYKYLPE TLNYTEQMSK SRYCLCPSGW EVASPRVVEA 250 260 270 280 290 300 IYSGCVPVII SDYYVLPFSD VLDWIKFSVH IPVSGIPEIK TILQSIPVEE YLEKQKRVLQ 310 320 330 VQQHFKLHRP AKPFDVVHMV MHSVWLRRLN IRLPR

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000354 Genomic DNA. Translation: EEF03438.1.
RefSeq	XP_002324873.1. XM_002324837.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7458380.
KEGG	pop:POPTR_809130.
Phylogenomic databases
GeneTree	EPGT00070000028243.
OMA	WAPDVSA.
ProtClustDB	CLSN2686593.
Family and domain databases
InterPro	IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9IKZ6_POPTR

Accession

Primary (citable) accession number: B9IKZ6

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)