B9IKZ4 (B9IKZ4_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEF03436.1

Gene names

ORF Names:

POPTRDRAFT_809129 EMBL EEF03436.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	334 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9IKZ4 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 998B09CD5F952545	FASTA	334	39,009
	10 20 30 40 50 60 MEKRFKVHVY SEGELPIVHD GPCKDIYTIE GRFIHEMEHG AKRFKTRDPR RAHVYFMPFS 70 80 90 100 110 120 VTWMVKYLYK PLTYDHTAMK QFVADYVRVV SSKYPFWNRT QGADHFMLSC HDWGPHASHG 130 140 150 160 170 180 NPFLYNTSIR VLCNANSSEG FSPRKDVSLP EIHLYGGNVP PKLISPPPAT SPRPYLAFFS 190 200 210 220 230 240 GGLHGPIRPI LLDHWKGRDP DLQVYEYLPK DLDYYSFMLR SKFCLCPSGH EVASPRIVEA 250 260 270 280 290 300 IYAECVPVIL SDHYVLPFSD VLRWEAFAIQ VNVSEIPRLK EVLISVPEER YRRLKEGLRA 310 320 330 IRKHFVLNQP AKRFDVFHMI LHSIWLRRLN LRLV

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000354 Genomic DNA. Translation: EEF03436.1.
RefSeq	XP_002324871.1. XM_002324835.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7465397.
KEGG	pop:POPTR_809129.
Phylogenomic databases
GeneTree	EPGT00070000028243.
OMA	YTIEGRF.
ProtClustDB	CLSN2720861.
Family and domain databases
InterPro	IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9IKZ4_POPTR

Accession

Primary (citable) accession number: B9IKZ4

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)