B9IKH3 (B9IKH3_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEF02780.1

Gene names

ORF Names:

POPTRDRAFT_578044 EMBL EEF02780.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	836 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 protein kinase domain. SAAS SAAS013210

Ontologies

Keywords
Cellular component	Membrane
Domain	Leucine-rich repeat SAAS SAAS013210 Repeat SAAS SAAS013210 Transmembrane Transmembrane helix SAAS SAAS013210
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro protein kinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9IKH3 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: B410385C21831AE1	FASTA	836	91,550
	10 20 30 40 50 60 MSNAENQELE LLLSFKTSLN DPSKYLSNWN TSATFCNWLG ITCTNSSRIS GIELSGKNIS 70 80 90 100 110 120 GKISSLIFHF PYIQTIDLSS NQLSGKLPDD IFLSSSLRYL NLSNNNFTGP IPSGSIPLLE 130 140 150 160 170 180 TLDLSNNMLS GKIPQEIGSF FSLKFLDLGG NALVGKIPPS ITKLTSLKVF TLASNQLVGQ 190 200 210 220 230 240 IPHELGQMRS LKLIYLGYNN LSGEIPTEIG QLISLNHLDL VYNNLIGQIP SSLGNLTDLQ 250 260 270 280 290 300 YLFLYQNKFT GPIPKSIFGL TKLISLDLSD NFLSGEIPEL IIQLKNLEIL HLFSNHFTGK 310 320 330 340 350 360 IPVALSSLPR LQVLQLWSNK LSGEIPKDLG KHNNLTVLDL STNSLSGRIP EGLCSSGNLF 370 380 390 400 410 420 KLILFSNSLE GEIPKSLSAC KSMRRIRLQD NSLSGELSSE FTKLPLVYFL DISANKLLGR 430 440 450 460 470 480 IDSRKWEMPS LQMLSLARNS FFGGLPDSFG SDNLENLDLS HNQFSGAIPN KFGSLSELMQ 490 500 510 520 530 540 LNLSKNKLSG EIPDELSSCE KLVSLDLSQN KLSGQIPAGF AEMPVLGQLD LSYNELSGEV 550 560 570 580 590 600 PANLGKEESL VQVNISHNHF HGSLPSTGAF LAINASAVAG NDLCGGDKTS GLPPCRRVKS 610 620 630 640 650 660 PLWWFYVACS LGALVLLALV ASGFVFFRGK RNSELKRVEN EDGTWELLLF NSKVSRSIAI 670 680 690 700 710 720 EDIIMSLKEE NLISRGKEGA SYKGKSIAND MQFILKKTND VNSIPPSEVA ELGKLQHPNI 730 740 750 760 770 780 VKLFGLCRSN KGAYVVHEYI DGKQLSEVLR NLSWERRQQI AIGIAKALRF LHCYCSPRVL 790 800 810 820 830 VGYLSPGKII VDGKYVPHLI VSLPGSLCID NTKCFISSAY VAPGNWSISL LATNGN

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000354 Genomic DNA. Translation: EEF02780.1.
RefSeq	XP_002324215.1. XM_002324179.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7476696.
KEGG	pop:POPTR_578044.
Phylogenomic databases
GeneTree	EPGT00070000028226.
OMA	GISELMS.
Family and domain databases
InterPro	IPR011009. Kinase-like_dom. IPR001611. Leu-rich_rpt. IPR013210. LRR-contain_N2. IPR000719. Prot_kinase_cat_dom. IPR017442. Se/Thr_kinase-like_dom. [Graphical view]
Pfam	PF00560. LRR_1. 10 hits. PF08263. LRRNT_2. 1 hit. PF00069. Pkinase. 1 hit. [Graphical view]
SUPFAM	SSF56112. Kinase_like. 1 hit.
PROSITE	PS50011. PROTEIN_KINASE_DOM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9IKH3_POPTR

Accession

Primary (citable) accession number: B9IKH3

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)