B9IKH2 (B9IKH2_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEF02779.1

Gene names

ORF Names:

POPTRDRAFT_911655 EMBL EEF02779.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	972 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 protein kinase domain. SAAS SAAS013210

Ontologies

Keywords
Cellular component	Membrane
Domain	Leucine-rich repeat SAAS SAAS013210 Repeat SAAS SAAS013210 Transmembrane Transmembrane helix SAAS SAAS013210
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro protein kinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9IKH2 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 38B30B4D60AEF9E3	FASTA	972	107,028
	10 20 30 40 50 60 MESTKGPQPC PMLLFMLLFL FLNSRMSNAE NQELELLLSF KTSLNDPSKY LSNWNTSATF 70 80 90 100 110 120 CNWLGITCTN SSRISGIELS GKNISGKISS LIFHFPYIQT IDLSSNQLSG KLPDDIFLSS 130 140 150 160 170 180 SLRYLNLSNN NFTGPIPSGS IPLLETLDLS NNMLSGKIPQ EIGSFFSLKF LDLGGNALVG 190 200 210 220 230 240 KIPPSITKLT SLKVFTLASN QLVGQIPHEL GQMRSLKLIY LGYNNLSGEI PTEIGQLISL 250 260 270 280 290 300 NHLDLVYNNL IGQIPSSLGN LTDLQYLFLY QNKFTGPIPK SIFGLTKLIS LDLSDNFLSG 310 320 330 340 350 360 EIPELIIQLK NLEILHLFSN HFTGKIPVAL SSLPRLQVLQ LWSNKLSGEI PKDLGKHNNL 370 380 390 400 410 420 TVLDLSTNSL SGRIPEGLCS SGNLFKLILF SNSLEGEIPK SLSACKSMRR IRLQDNSLSG 430 440 450 460 470 480 ELSSEFTKLP LVYFLDISAN KLLGRIDSRK WEMPSLQMLS LARNSFFGGL PDSFGSDNLE 490 500 510 520 530 540 NLDLSHNQFS GAIPNKFGSL SELMQLNLSK NKLSGEIPDE LSSCEKLVSL DLSQNKLSGQ 550 560 570 580 590 600 IPAGFAEMPV LGQLDLSYNE LSGEVPANLG KEESLVQVNI SHNHFHGSLP STGAFLAINA 610 620 630 640 650 660 SAVAGNDLCG GDKTSGLPPC RRVKSPLWWF YVACSLGALV LLALVASGFV FFRGKRNSEL 670 680 690 700 710 720 KRVENEDGTW ELLLFNSKVS RSIAIEDIIM SLKEENLISR GKEGASYKGK SIANDMQFIL 730 740 750 760 770 780 KKTNDVNSIP PSEVAELGKL QHPNIVKLFG LCRSNKGAYV VHEYIDGKQL SEVLRNLSWE 790 800 810 820 830 840 RRQQIAIGIA KALRFLHCYC SPRVLVGYLS PGKIIVDGKY VPHLIVSLPG SLCIDNTKCF 850 860 870 880 890 900 ISSAYVAPET RETKDISEKS DMYGFGLVLI ELLTGKGPAD AEFGVHESIV KWARYCYSDC 910 920 930 940 950 960 HLDMWIDPMI RRNASINENE MVETMNLALQ CTATEPTARP CANEVSKTLE SASKTSSCVL 970 GLKFSSLFKY FN

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000354 Genomic DNA. Translation: EEF02779.1.
RefSeq	XP_002324214.1. XM_002324178.1.
UniGene	Pth.2138.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0018s08150.1; POPTR_0018s08150.1; POPTR_0018s08150.
GeneID	7476695.
KEGG	pop:POPTR_911655.
Phylogenomic databases
PhylomeDB	B9IKH2.
ProtClustDB	PLN00113.
Family and domain databases
InterPro	IPR011009. Kinase-like_dom. IPR001611. Leu-rich_rpt. IPR013210. LRR-contain_N2. IPR000719. Prot_kinase_cat_dom. IPR001245. Ser-Thr/Tyr_kinase. [Graphical view]
Pfam	PF00560. LRR_1. 9 hits. PF08263. LRRNT_2. 1 hit. PF07714. Pkinase_Tyr. 1 hit. [Graphical view]
SUPFAM	SSF56112. Kinase_like. 1 hit.
PROSITE	PS50011. PROTEIN_KINASE_DOM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9IKH2_POPTR

Accession

Primary (citable) accession number: B9IKH2

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)