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B9IEM0 (B9IEM0_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEF05692.1
Gene names
ORF Names:POPTRDRAFT_575111 EMBL EEF05692.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length567 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functioncalcium ion binding

Inferred from electronic annotation. Source: InterPro

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9IEM0 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: DD24E964CA4720E4

FASTA56765,067
        10         20         30         40         50         60 
MLACRFRTWV LLLLVIFPSL FDPSFSHFDS AKKKQMREKV RKMFYHAYEN YMTHAFPHDE 

        70         80         90        100        110        120 
LKPLSRSFTD SLSELGNLKL EHLPQNYNGT ALTLIESLSS LVILGNYTEF ERAVLWLSEN 

       130        140        150        160        170        180 
LTFDVDARVN LFECNIRVLG GLVSAHILAT DSTNRLVQGS YKNQLLVLAE DLGRRFLPAF 

       190        200        210        220        230        240 
DTPTGLPYAW INLKYGVMKN ETTETSTSGC GSLILEMGAL SRLTGDPRYE SAALRALRKL 

       250        260        270        280        290        300 
WSMRSSLNLL GTTLDVETGE WIEHSSGIGA GVDSFYEYLF KAHILFGKED FWRMFHSAYL 

       310        320        330        340        350        360 
AVQKYFRHGP WYHEADMRTG KATYWQLTSL QAFWPGLQAT ANSSHREFVH VWKKFGVLPE 

       370        380        390        400        410        420 
RYLLDHQMLH PTEKYYPLRP ELAESTFYLY QATKDPWYIE VGETIVNSLN SYTKVEGGFA 

       430        440        450        460        470        480 
SIRDVTTMQT EDHMHSFFLA ETCKYLYLLF DDSFLVDRNY IFTTEGHPLP VLSAWHERLP 

       490        500        510        520        530        540 
EIYIPSNWTY VKNERQTKRS SAMSLQVCPA LSLNAGHGEQ QVESACHVPD DQSDHKCFSD 

       550        560 
EECGVDSTSC RRRSCSMAGY CGLWLVA

« Hide

References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000351 Genomic DNA. Translation: EEF05692.1.
RefSeqXP_002321565.1. XM_002321529.1.
UniGenePth.6400.

3D structure databases

ProteinModelPortalB9IEM0.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0015s08280.1; POPTR_0015s08280.1; POPTR_0015s08280.
GeneID7474874.
KEGGpop:POPTR_575111.

Phylogenomic databases

GeneTreeEPGT00050000018377.
OMALFECNIR.
PhylomeDBB9IEM0.
ProtClustDBCLSN2679415.

Family and domain databases

InterProIPR001382. Glyco_hydro_47.
[Graphical view]
Gene3DG3DSA:1.50.10.50. Glyco_hydro_47. 1 hit.
PANTHERPTHR11742. Glyco_hydro_47. 1 hit.
PfamPF01532. Glyco_hydro_47. 1 hit.
[Graphical view]
PRINTSPR00747. GLYHDRLASE47.
SUPFAMSSF48225. Glyco_hydro_47. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9IEM0_POPTR
AccessionPrimary (citable) accession number: B9IEM0
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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