B9IE09 (B9IE09_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEF06167.1

Gene names

ORF Names:

POPTRDRAFT_835082 EMBL EEF06167.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	1197 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003532 WD repeat RuleBase RU000362
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	guard mother cell cytokinesis Inferred from electronic annotation. Source: EnsemblPlants/Gramene multidimensional cell growth Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9IE09 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 4C2EF2A2C0A9C53C	FASTA	1,197	132,992
	10 20 30 40 50 60 MAGIFEYFVV CGLGPEMRTM DGNKGYHGMR VLYLPSLLDQ YPPDNHSLYP PPPPQLPTCV 70 80 90 100 110 120 LPAGVEFYPS GLDANDSSTF PKSYPIVLTE GDGSKIYVSC IAFRDPVSED IAEAYRIPPN 130 140 150 160 170 180 SFADKCICLV SRSPSFGVLR TALEELFALC FSPAGSSKPL WDVISYMVSN VPLPTPGKDR 190 200 210 220 230 240 VLFAIENCLL SVEAPPKDGL PHVEISFQPL VQCLDVDNLL KLFTAVLLER RILLRSNKYS 250 260 270 280 290 300 LLTLASEAIC HLIYPLRWQH VYIPLLFFSG VDYIDAPTPY MMGLHSAVDT SYLAMDGVVV 310 320 330 340 350 360 VDLEYNRICT SEEIPPIPEP ELSTLRGEIL KLLYPNVMGI DQMKAGLVSS SEQYFKGCNK 370 380 390 400 410 420 PWGEDHDLQL RLIFLKFFAS ILGGYRNFIE NTATHAFNTQ AFLRKRSRST NQPPDAMITQ 430 440 450 460 470 480 FLDSHGFLDY LERVIDSDEN NYNLLDKLQD AIGRGQNPIS VLPSSWVEPE IITISDPDVG 490 500 510 520 530 540 ILGSGAKFTY DRFPANIRSE EHEEKRKQIL AAASGAFDYI KHAPSSPSVQ VGKDSLSPME 550 560 570 580 590 600 RAAERERMVL DIKVKLQGLW LRLLKLRATD DPLSSFEYGT ILALIESDAE GIGGSGFVEC 610 620 630 640 650 660 IREHIHSGWH CQLTDEQFIA VKELLKTAIS RATSRNDVST IRDALEVSAE MYKRDANNVS 670 680 690 700 710 720 DYVQRHLISL SIWEELRFWE GYFEYLMEHP SSKSANYSAL VTTQLILVAL HMAGLGLLDT 730 740 750 760 770 780 DAWHMIETIA EKNNIGYKQF IKLRGFLSHI QQVRISYWGI SSVKAQSMRS PGLSSPRPKD 790 800 810 820 830 840 SMDENEQPAE ASVIGRSWVQ SMFSRDPSRA NSFGRVRKGA SDGTSDSSAA GQKKLQTNVR 850 860 870 880 890 900 ILRGHSGAVT ALHCVTRREV WDLVGDREDA GFFISGSTDC MVKIWDPSIR GSELRATLKG 910 920 930 940 950 960 HTRTVRAISS DRGKVVSGSD DQSVIVWDKQ TSQLLEELKG HDAQVSCVRM LSGERVLTAA 970 980 990 1000 1010 1020 HDGTVKMWDV RTDTCVATVG RCSSAVLCME YDDSTGILAA AGRDAVANIW DIRAGRQMHK 1030 1040 1050 1060 1070 1080 LLGHTKWIRS IRMVGDTLIT GSDDWTARVW SVSRGTCDAV LACHAGPILC VEYSMSDRGI 1090 1100 1110 1120 1130 1140 ITGSTDGLLR FWENEEEGIR CVKNVTIHTA PILSINAGEH WLGIGAADNS MSLFHQPQER 1150 1160 1170 1180 1190 LGGFSSTGSK MSGWQLYRTP QRTVAMVRCV ASDLERKRIC SGGRNGVLRL WEATINI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000351 Genomic DNA. Translation: EEF06167.1.
RefSeq	XP_002322040.1. XM_002322004.1.
UniGene	Pth.5044.
3D structure databases
ProteinModelPortal	B9IE09.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0015s03420.1; POPTR_0015s03420.1; POPTR_0015s03420.
GeneID	7453856.
KEGG	pop:POPTR_835082.
Phylogenomic databases
eggNOG	COG2319.
HOGENOM	HOG000029412.
OMA	YRNFIEN.
ProtClustDB	CLSN2680426.
Family and domain databases
Gene3D	2.130.10.10. 1 hit.
InterPro	IPR005112. dDENN_dom. IPR001194. DENN_dom. IPR020472. G-protein_beta_WD-40_rep. IPR005113. uDENN_dom. IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR019775. WD40_repeat_CS. IPR017986. WD40_repeat_dom. [Graphical view]
Pfam	PF03455. dDENN. 1 hit. PF02141. DENN. 1 hit. PF03456. uDENN. 1 hit. PF00400. WD40. 5 hits. [Graphical view]
PRINTS	PR00320. GPROTEINBRPT.
SMART	SM00801. dDENN. 1 hit. SM00799. DENN. 1 hit. SM00800. uDENN. 1 hit. SM00320. WD40. 8 hits. [Graphical view]
SUPFAM	SSF50978. WD40_like. 1 hit.
PROSITE	PS50947. DDENN. 1 hit. PS50211. DENN. 1 hit. PS50946. UDENN. 1 hit. PS00678. WD_REPEATS_1. 4 hits. PS50082. WD_REPEATS_2. 5 hits. PS50294. WD_REPEATS_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9IE09_POPTR

Accession

Primary (citable) accession number: B9IE09

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)