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B9IBI7 (B9IBI7_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE98954.1
Gene names
ORF Names:POPTRDRAFT_243581 EMBL EEE98954.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length375 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL EEE98954.1
Non-terminal residue3751 EMBL EEE98954.1

Sequences

Sequence LengthMass (Da)Tools
B9IBI7 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: F46C3FB572CF72DF

FASTA37542,825
        10         20         30         40         50         60 
RKLKVFVYDL PPEFHFGLLG WKGNTNQTWP NVDSHSRIPP YPGGLNLQHS VEYWLTLDLL 

        70         80         90        100        110        120 
ASNTPKVGTA VRVQNSSQAD IVFVPFFSSL SYNRHSKLHG KEKVSVNKML QTKLVQFLTA 

       130        140        150        160        170        180 
RDEWKRFGGN DHLIVAHHPN SMLHARKKLG SAMFVLADFG RYPVEIANLG KDIIAPYKHV 

       190        200        210        220        230        240 
VRTIPSGESA QFDRRPILMH FQGAIYRKDG GAIRQELYYL LKDEKDVHFT FGTYRGNGIK 

       250        260        270        280        290        300 
KAAQGMASSK FCLNIAGDTP SSNRLFDAIA SHCVPVIISD DIELPFEDVL DYSEFCLFVR 

       310        320        330        340        350        360 
ASDAVKKGYL LDLLRGIEKD QWTKLWERLK EIAPHFEYSY PSQPGDAVDM VWKAVLRKTS 

       370 
SVQFKRHRKN RYARP

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000350 Genomic DNA. Translation: EEE98954.1.
RefSeqXP_002320639.1. XM_002320603.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7455726.
KEGGpop:POPTR_243581.

Phylogenomic databases

GeneTreeEPGT00050000007377.
OMAGMASSKF.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9IBI7_POPTR
AccessionPrimary (citable) accession number: B9IBI7
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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