B9IAW3 (B9IAW3_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE98852.1

Gene names

ORF Names:

POPTRDRAFT_573135 EMBL EEE98852.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9IAW3 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 0524053D8C8E720C	FASTA	395	45,985
	10 20 30 40 50 60 MRGGNRSDAK LERVEAGLAM ARALIREAAE DNNCTSSLHD DLDYIPRGYI YRNACAFHRS 70 80 90 100 110 120 YLLMEKLFKI FVYEEGEPPL FHYGTCKDIY SMEGVFLSLM ETNTKFRTSN PDEAHVYFLP 130 140 150 160 170 180 FSVVMIIEHL FHPIIRDKAV LERTVSDYVR IISHKYLYWN RSLGADHFML SCHDWGPRAT 190 200 210 220 230 240 WYVRQLYYNS IRVLCNANTS EYFNPKKDAS FPEINLKTGE ITGLTGGLPP SNRTVLAFFA 250 260 270 280 290 300 GKMHGKLRPA LLQHWMGKDK DVQVYETLPQ GISYHEMMKK SKYCICPSGH EVASPRIAEA 310 320 330 340 350 360 IYAECVPVLI SQHYIFPFSD VLNWDSFTIQ VPVTEIPNLK NILEGIPEDQ YLRMQERVRQ 370 380 390 VQRHFVVNNP PRRYDVFHMI IHSIWLRRLN VRFPG

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000350 Genomic DNA. Translation: EEE98852.1.
RefSeq	XP_002320537.1. XM_002320501.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7456021.
KEGG	pop:POPTR_573135.
Phylogenomic databases
GeneTree	EPGT00070000028243.
OMA	ICPSGHE.
ProtClustDB	CLSN2720161.
Family and domain databases
InterPro	IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9IAW3_POPTR

Accession

Primary (citable) accession number: B9IAW3

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)