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B9I6E5 (B9I6E5_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE95133.1
Gene names
ORF Names:POPTRDRAFT_1096949 EMBL EEE95133.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell death

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9I6E5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 3430407DC11E2E01

FASTA52559,383
        10         20         30         40         50         60 
MSGGSEGETL EYTPTWVVAA LCTVIVALSL AAERLLHYCG IFLRRKNQKP LYEALQKVKE 

        70         80         90        100        110        120 
ELMLLGFISL LLTVSQNSIA KTCVPENVVN DLLPCRLSEK QKEEGLGSNS TTTPKHYQSF 

       130        140        150        160        170        180 
FPGTISGTVR RLLAEASEAN LGYCAKKGKV PLLSLEAIHH LHIFIFVLAI VHVTFCVLTI 

       190        200        210        220        230        240 
LFGGARIRQW KHWENEIAND RFLKKKFTHV QQHTFIKEHF LGIGKNSALR VWLHSFFKQF 

       250        260        270        280        290        300 
YASVTKSDYI TLRLGFIMTH TRGNPKFNFH RYMVRSLEDD FKTVVGIRQV IWYLWVFVVI 

       310        320        330        340        350        360 
FLLLNINGWH TYFWIAFIPL ILLLAVGTKL EHVINQLAYE VAEKHVAIEG ELVVQPSDNH 

       370        380        390        400        410        420 
FWFHRPGFVH LLIHFILFQN AFEIAFFFWI WVQYGFDSCI MGQIKYIVPR LIIGVFIQVL 

       430        440        450        460        470        480 
CSYSTLPLYA IVSQMGSTFK KSIFEEHVQA GLVGWAQKVK KKRGQKGSTE GSSEASSHVS 

       490        500        510        520 
AGGLLLGRLK GLKEANEGSA QSSSHEGSTL GNNASAPPVP REAEP

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000349 Genomic DNA. Translation: EEE95133.1.
RefSeqXP_002319210.1. XM_002319174.1.
UniGenePth.17214.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7482401.
KEGGpop:POPTR_1096949.

Phylogenomic databases

GeneTreeEPGT00050000013153.
ProtClustDBCLSN2685759.

Family and domain databases

InterProIPR004326. Mlo.
[Graphical view]
PfamPF03094. Mlo. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9I6E5_POPTR
AccessionPrimary (citable) accession number: B9I6E5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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