B9I6C6 (B9I6C6_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE95377.1

Gene names

ORF Names:

POPTRDRAFT_834438 EMBL EEE95377.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	507 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the peptidase A1 family. RuleBase RU000454

Ontologies

Keywords
Molecular function	Aspartyl protease RuleBase RU000454 SAAS SAAS001969 Hydrolase Protease
PTM	Disulfide bond SAAS SAAS011001
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	lipid metabolic process Inferred from electronic annotation. Source: InterPro proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	aspartic-type endopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9I6C6 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: CD8C98BAC2889C3B	FASTA	507	54,988
	10 20 30 40 50 60 MGNKILLKAF CLWALTCFLL PASSNGLVRI GLKKRHLDLQ TIKDAIIARQ EGKAGVGASS 70 80 90 100 110 120 RVHDLGSSDG DIIPLKNYLD AQYLGEIGIG SPPQNFTVVF DTGSSNLWVP SSKCYFSIAC 130 140 150 160 170 180 YFHSKYKSSR SSTYTKNGNF CEIHYGSGSV SGFFSQDNVQ VGDLVVKDQV FVEATKEGSL 190 200 210 220 230 240 SFILGKFDGI LGLGFQEISV GNVVPLWYNM IQQDLVDDEV FSFWLNRNPE AKEGGELVFG 250 260 270 280 290 300 GVDPKHFKGK HTYVPVTQKG YWQINMGDFL IGKHSTGLCE GGCAAIVDSG TSLLAGPTPI 310 320 330 340 350 360 ITEINHAIGA EGLVSAECKE VVSHYGDLIW ELIISGVQPS KVCTQLGLCI FNEAKSARTG 370 380 390 400 410 420 IESVVEKENK EKSSAGNDLP CTACQMLVIW VQNQLREKAT KETAINYLDK LCESLPSPMG 430 440 450 460 470 480 QSSIDCNSIS TMPNITFTIG DKPFSLTPEQ YILKTGEGIA QVCISGFMAL DVPPPRGPLW 490 500 ILGDVFMGAY HTIFDYGNLE VGFAEAA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000349 Genomic DNA. Translation: EEE95377.1.
RefSeq	XP_002319454.1. XM_002319418.1.
UniGene	Pth.15489.
3D structure databases
ModBase	Search...
Protein family/group databases
MEROPS	A01.020.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7478872.
KEGG	pop:POPTR_834438.
Phylogenomic databases
eggNOG	NOG248684.
HOGENOM	HOG000197681.
KO	K08245.
ProtClustDB	CLSN2926781.
Family and domain databases
Gene3D	1.10.225.10. 2 hits. 2.40.70.10. 3 hits.
InterPro	IPR001461. Peptidase_A1. IPR021109. Peptidase_aspartic. IPR001969. Peptidase_aspartic_AS. IPR007856. SapB_1. IPR008138. SapB_2. IPR011001. Saposin-like. IPR008139. SaposinB. [Graphical view]
PANTHER	PTHR13683. PTHR13683. 1 hit.
Pfam	PF00026. Asp. 1 hit. PF05184. SapB_1. 1 hit. PF03489. SapB_2. 1 hit. [Graphical view]
PRINTS	PR00792. PEPSIN.
SMART	SM00741. SapB. 1 hit. [Graphical view]
SUPFAM	SSF50630. Pept_Aspartic. 1 hit. SSF47862. Saposin_like. 1 hit.
PROSITE	PS00141. ASP_PROTEASE. 2 hits. PS50015. SAP_B. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9I6C6_POPTR

Accession

Primary (citable) accession number: B9I6C6

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	March 6, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)