B9I417 (B9I417_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE97003.1

Gene names

ORF Names:

POPTRDRAFT_570368 EMBL EEE97003.1, POPTRDRAFT_834376 EMBL EEE96400.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	417 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9I417 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: CD0D23DAC328EE8D	FASTA	417	47,551
	10 20 30 40 50 60 MEIWKWVFVG VLWYAGFVLS TGAVELGRSQ HTERISGSAG DVLEDDPVGR LKVFVYELPR 70 80 90 100 110 120 KYNKKILQKD PRCLTHMFAA EIFMHRFLLS SPVRTLNPDE ADWFYTPVYT TCDLTTNGLP 130 140 150 160 170 180 LPFKSPRMMR SAIQLISSNW PYWNRTEGAD HFFVVPHDFG ACFHYQEEKA IERGILPLLQ 190 200 210 220 230 240 RATLVQTFGQ RNHVCLKDGS ITVPPYAPPQ KMQTHLIPEK TPRSIFVYFR GLFYDVGNDP 250 260 270 280 290 300 EGGYYARGAR AAVWENFKDN PLFDISTEHP ATYYEDMQRA VFCLCPLGWA PWSPRLVEAV 310 320 330 340 350 360 IFGCIPVIIA DDIVLPFADA IPWEEIGVYV DEEDVPNLDT ILTSIPPEVI LRKQRLLANP 370 380 390 400 410 SMKQAMLFPQ PAQPGDAFHQ VLNGLARKLP HDRSVYLRPG EKILNWTAGP VGDLKPW

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000348 Genomic DNA. Translation: EEE96400.1. CM000348 Genomic DNA. Translation: EEE97003.1.
RefSeq	XP_002318180.1. XM_002318144.1. XP_002318783.1. XM_002318747.1.
UniGene	Pth.2431.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0012s11100.1; POPTR_0012s11100.1; POPTR_0012s11100.
GeneID	7484347. 7484893.
KEGG	pop:POPTR_570368. pop:POPTR_834376.
Phylogenomic databases
OMA	ILQKDPR.
PhylomeDB	B9I417.
ProtClustDB	CLSN2682887.
Family and domain databases
InterPro	IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9I417_POPTR

Accession

Primary (citable) accession number: B9I417

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)