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B9I383 (B9I383_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length536 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU003344
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processresponse to cadmium ion

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionATP binding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9I383 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 99405C4A58B0775D

FASTA53658,648
        10         20         30         40         50         60 
MAARRISSLL SRSLSASASF LLSRGKNPSR GRSIYRFITA KALEEPITPP VQISYTQHFI 

        70         80         90        100        110        120 
NGKFVDAASG KTFPAYDPRT GEVIAHVAEG DNEDVNRAVA AARKAFDEGP WPKMSAYERS 

       130        140        150        160        170        180 
LIMLRFADLV DKHRDELAAL ESWNSGKPYE QSAKSELPSF ARLFRYYAGW ADKIHGLTVP 

       190        200        210        220        230        240 
ADSNHYVQTL HEPIGVAGQI IPWNFPLIML AWKVGPALAC GNTIVLKSAE QTPLTALHAA 

       250        260        270        280        290        300 
KLFQEAGLPP GVLNVVSGYG PSAGAALASH MNVDKLAFTG STETGKIILE LAAKSNLKSV 

       310        320        330        340        350        360 
TLELGGKSPF IVCEDADVDK AVELAHHALF FNQGQCCCAG SRTYVHERVY DEFIEKAKAR 

       370        380        390        400        410        420 
ALRRVVGDPF KKGVEQGPQI DSDQFEKVLR YIRSGVESNA TLECGGQRFG SKGYFIQPTV 

       430        440        450        460        470        480 
FSNVEDDMLI AQDEIFGPVQ SILKFKNVDE VIRRSNSTRY GLAAGIFTKN VDTANTLSRA 

       490        500        510        520        530 
LRVGTVWVNC FDVFDAAIPF GGYKMSGIGR EKGIYSLNNY LQVKAVVTPL KNPAWL 

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000348 Genomic DNA. Translation: EEE96254.1.
RefSeqXP_002318034.1. XM_002317998.2.

3D structure databases

ProteinModelPortalB9I383.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0012s08010.1; POPTR_0012s08010.1; POPTR_0012s08010.
GeneID7483487.
KEGGpop:POPTR_0012s08010g.

Phylogenomic databases

KOK00128.
OMATLINHEP.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR015657. Aminobutyraldehyde_DH.
[Graphical view]
PANTHERPTHR11699:SF46. PTHR11699:SF46. 1 hit.
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9I383_POPTR
AccessionPrimary (citable) accession number: B9I383
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)