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B9I1U5 (B9I1U5_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:POPTR_0011s11190g EMBL EEE97473.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome] EMBL EEE97473.1
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

Protein attributes

Sequence length966 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
B9I1U5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 51174E2CAB03C152

FASTA966110,468
        10         20         30         40         50         60 
MANFRNLEKL ASIDAQLRLL VPGKVSEDDK LIEYDALLLD RFLDILQDLH GEDLKETVQE 

        70         80         90        100        110        120 
CYELSAEYEG KHDPKKLEEL GSVLTSLDPG DSIVIAKSFS HMLNLANLAE EVQIAYRRRN 

       130        140        150        160        170        180 
KLKKGDFADE NSATTESDIE ETLRRLVVDL KKSPEEVFDA LKNQTVDLVL TAHPTQSVRR 

       190        200        210        220        230        240 
SLLQKHARLR NCLAQLYAKD ITPNEKQELD EALQREIQAA FRTDEIRRTP PTPQDEMRAG 

       250        260        270        280        290        300 
MSYFHETIWK GVPKFLRRVD TALKNIGINE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT 

       310        320        330        340        350        360 
RDVCLLARMM AANLYYSQIE DLMFELSMWR CSDELRVRAD VLHRSSKRDS KHYIEFWKQI 

       370        380        390        400        410        420 
PPNEPYRVIL GELRDRLYQT RERSRQLLSH GISETPEEAT FTNVEQFLEP LELCYRSLCS 

       430        440        450        460        470        480 
CGDRPIADGS LLDFLRQVST FGLSLVRLDI RQESDRHTDV MDAITKHLEI GSYREWSEEQ 

       490        500        510        520        530        540 
RQEWLLSELS GKRPLFGPDL PKTEEIADVL DTFHVIAELP SDSFGAYIIS MATAASDVLA 

       550        560        570        580        590        600 
VELLQRECHV KQPLRVVPLF EKLADLEAAP AALSRLFSIE WYRDQINGKQ EVMIGYSDSG 

       610        620        630        640        650        660 
KDAGRFSAAW QLYKAQEELI KVAKQYGVKL TMFHGRGGTV GRGGGPTHLA ILSQPPDTIH 

       670        680        690        700        710        720 
GSLRVTVQGE VIEQSFGEEH LCFRTLQRFA AATLEHGMHP PVSPKPEWRA LMDEMAVVAT 

       730        740        750        760        770        780 
EEYRSIVFKE PRFVEYFRLA TPELEYGRMN IGSRPSKRKP SGGIESLRAI PWIFAWTQTR 

       790        800        810        820        830        840 
FHLPVWLGFG AAFKHVIQKD IRNLHMLQEM YNEWPFFRVT IDLVEMVFAK GDPGIAALND 

       850        860        870        880        890        900 
KLLVSKELWP FGEKLRANYK ETKSLLLQIA GHKDLLEGDP YLKQRLRLRD SYITTLNVCQ 

       910        920        930        940        950        960 
AYTLKRIRDP NYCVTPRPHL SKEIMESNKP ADELVKLNPT SDYAPGMEDT LILTMKGIAA 


GMQNTG 

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000347 Genomic DNA. Translation: EEE97473.1.
RefSeqXP_002316861.1. XM_002316825.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3694.estExt_Genewise1_v1.C_LG_XI3607.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0011s11190.1; POPTR_0011s11190.1; POPTR_0011s11190.
GeneID7472353.
KEGGpop:POPTR_0011s11190g.

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
OMATIITHRE.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 2 hits.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9I1U5_POPTR
AccessionPrimary (citable) accession number: B9I1U5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)