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Protein
Submitted name:

Phosphoenolpyruvate carboxylase family protein

Gene

POPTR_0011s11190g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

PyruvateImported

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphoenolpyruvate carboxylase family proteinImported
Gene namesi
ORF Names:POPTR_0011s11190gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
ProteomesiUP000006729 Componenti: Linkage group LGXI

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0011s11190.1.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiB9I1U5.
KOiK01595.
OMAiFTIFEER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9I1U5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANFRNLEKL ASIDAQLRLL VPGKVSEDDK LIEYDALLLD RFLDILQDLH
60 70 80 90 100
GEDLKETVQE CYELSAEYEG KHDPKKLEEL GSVLTSLDPG DSIVIAKSFS
110 120 130 140 150
HMLNLANLAE EVQIAYRRRN KLKKGDFADE NSATTESDIE ETLRRLVVDL
160 170 180 190 200
KKSPEEVFDA LKNQTVDLVL TAHPTQSVRR SLLQKHARLR NCLAQLYAKD
210 220 230 240 250
ITPNEKQELD EALQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK
260 270 280 290 300
GVPKFLRRVD TALKNIGINE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
310 320 330 340 350
RDVCLLARMM AANLYYSQIE DLMFELSMWR CSDELRVRAD VLHRSSKRDS
360 370 380 390 400
KHYIEFWKQI PPNEPYRVIL GELRDRLYQT RERSRQLLSH GISETPEEAT
410 420 430 440 450
FTNVEQFLEP LELCYRSLCS CGDRPIADGS LLDFLRQVST FGLSLVRLDI
460 470 480 490 500
RQESDRHTDV MDAITKHLEI GSYREWSEEQ RQEWLLSELS GKRPLFGPDL
510 520 530 540 550
PKTEEIADVL DTFHVIAELP SDSFGAYIIS MATAASDVLA VELLQRECHV
560 570 580 590 600
KQPLRVVPLF EKLADLEAAP AALSRLFSIE WYRDQINGKQ EVMIGYSDSG
610 620 630 640 650
KDAGRFSAAW QLYKAQEELI KVAKQYGVKL TMFHGRGGTV GRGGGPTHLA
660 670 680 690 700
ILSQPPDTIH GSLRVTVQGE VIEQSFGEEH LCFRTLQRFA AATLEHGMHP
710 720 730 740 750
PVSPKPEWRA LMDEMAVVAT EEYRSIVFKE PRFVEYFRLA TPELEYGRMN
760 770 780 790 800
IGSRPSKRKP SGGIESLRAI PWIFAWTQTR FHLPVWLGFG AAFKHVIQKD
810 820 830 840 850
IRNLHMLQEM YNEWPFFRVT IDLVEMVFAK GDPGIAALND KLLVSKELWP
860 870 880 890 900
FGEKLRANYK ETKSLLLQIA GHKDLLEGDP YLKQRLRLRD SYITTLNVCQ
910 920 930 940 950
AYTLKRIRDP NYCVTPRPHL SKEIMESNKP ADELVKLNPT SDYAPGMEDT
960
LILTMKGIAA GMQNTG
Length:966
Mass (Da):110,468
Last modified:March 24, 2009 - v1
Checksum:i51174E2CAB03C152
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000347 Genomic DNA. Translation: EEE97473.1.
RefSeqiXP_002316861.1. XM_002316825.2.

Genome annotation databases

EnsemblPlantsiPOPTR_0011s11190.1; POPTR_0011s11190.1; POPTR_0011s11190.
GeneIDi7472353.
KEGGipop:POPTR_0011s11190g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000347 Genomic DNA. Translation: EEE97473.1.
RefSeqiXP_002316861.1. XM_002316825.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0011s11190.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPOPTR_0011s11190.1; POPTR_0011s11190.1; POPTR_0011s11190.
GeneIDi7472353.
KEGGipop:POPTR_0011s11190g.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiB9I1U5.
KOiK01595.
OMAiFTIFEER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
    Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
    , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
    Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NisquallyImported.

Entry informationi

Entry nameiB9I1U5_POPTR
AccessioniPrimary (citable) accession number: B9I1U5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: July 22, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.