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B9HLG4 (B9HLG4_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE88435.1
Gene names
ORF Names:POPTRDRAFT_420899 EMBL EEE88435.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length380 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL EEE88435.1
Non-terminal residue3801 EMBL EEE88435.1

Sequences

Sequence LengthMass (Da)Tools
B9HLG4 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 5F8DA060C5FC6FCE

FASTA38044,127
        10         20         30         40         50         60 
PLKVYMYDLP RRFNIGMMQW KKGGGDDTPV RTAEELPRWP VNVGVRKQHS VEYWLMASLL 

        70         80         90        100        110        120 
GSGGEGEERE AVRVLDPEIA EAYFVPFFSS LSFNTHGRNM TDPETEKDRQ LQVDLIDFLQ 

       130        140        150        160        170        180 
KSKYWQRSGG RDHVIPMTHP NAFRFLRQLV NASILIVADF GRYPKSLSTL SKDVVSPYVH 

       190        200        210        220        230        240 
NVDSFKDDDL LDPFESRKTL LFFRGNTVRK DKGKVRAKLE KILAGYDDVR YERSSPTAEA 

       250        260        270        280        290        300 
IQASTQGMRS SKFCLHPAGD TPSSCRLFDA IVSHCVPVIV SDLIELPYED EIDYSQFSIF 

       310        320        330        340        350        360 
FSINEAIQPD YLVNQLRKFP KDRWIEMWRQ LKKISHHFEF QYPPVKEDAV NMLWRQVKNK 

       370        380 
LPGAQLAVHR NHRLKVPDWW

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000344 Genomic DNA. Translation: EEE88435.1.
RefSeqXP_002311068.1. XM_002311032.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7494930.
KEGGpop:POPTR_420899.

Phylogenomic databases

GeneTreeEPGT00070000031224.
OMAFEDEIDY.
ProtClustDBCLSN2690484.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9HLG4_POPTR
AccessionPrimary (citable) accession number: B9HLG4
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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