B9HKQ7 (B9HKQ7_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE88382.1

Gene names

ORF Names:

POPTRDRAFT_655777 EMBL EEE88382.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	416 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro diphosphomevalonate decarboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9HKQ7 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: C1C279743D5F47E9	FASTA	416	45,655
	10 20 30 40 50 60 MAEKTWVRMV TAQTPTNIAV IKYWGKRDET LILPVNDSIS VTLDPAHLCT TTTVAVSPSF 70 80 90 100 110 120 DQDRMWLNGK EISLSGGRYQ NCLREIRARA CAVEDKEKGI KIAKKDWEKL HLHVASYNNF 130 140 150 160 170 180 PTAAGLASSA AGFACLVFAL AKLMNAKEDN SELSAIARQG SGSACRSLFG GFVKWIMGKA 190 200 210 220 230 240 EDGSDSLAVQ LVDEKHWDEL VIIIAVVSSR QKETSSTTGM RDSVETSLLL QHRAKEVVPK 250 260 270 280 290 300 RIKQMEEAIK NRDFGSFAQL SCADSNQFHA VCLDTCPPIF YMNDTSHRII SCVEKWNCSE 310 320 330 340 350 360 GTPQVAYTFD AGPNAVLIAH NRKAATQLMQ KLLFCFPPSS DADLNSYVIG DKSILKDAGI 370 380 390 400 410 EDIKDVEALP PPPEIKDAQR CKGDVSYFIC TKPGRGPALL SDESQALLHP ETGLPK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000344 Genomic DNA. Translation: EEE88382.1.
RefSeq	XP_002311015.1. XM_002310979.1.
UniGene	Pth.8546.
3D structure databases
ProteinModelPortal	B9HKQ7.
ModBase	Search...
Protein-protein interaction databases
STRING	3694.grail3.0090014401.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0008s02200.1; POPTR_0008s02200.1; POPTR_0008s02200.
GeneID	7490899.
KEGG	pop:POPTR_655777.
Phylogenomic databases
eggNOG	COG3407.
HOGENOM	HOG000081923.
KO	K01597.
OMA	GAVIWHR.
ProtClustDB	PLN02407.
Family and domain databases
Gene3D	3.30.230.10. 1 hit.
InterPro	IPR006204. GHMP_kinase_N_dom. IPR005935. Mev_diP_decarb. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. [Graphical view]
PANTHER	PTHR10977. PTHR10977. 1 hit.
Pfam	PF00288. GHMP_kinases_N. 1 hit. [Graphical view]
PIRSF	PIRSF015950. Mev_P_decrbx. 1 hit.
SUPFAM	SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMs	TIGR01240. mevDPdecarb. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9HKQ7_POPTR

Accession

Primary (citable) accession number: B9HKQ7

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)