B9HKD6 (B9HKD6_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE89023.1

Gene names

ORF Names:

POPTRDRAFT_419089 EMBL EEE89023.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	565 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEE89023.1
	Non-terminal residue	565	1	EMBL EEE89023.1

Sequences

	Sequence		Length	Mass (Da)
	B9HKD6 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 53C4F7BEEFEB908C	FASTA	565	63,250
	10 20 30 40 50 60 ADGVTPEEAT LLRDEVREMF YHAFNGYMEH AFPLDELKPL SCEGEDSLGG YALTLIDSLD 70 80 90 100 110 120 MLALLGDRER FTSSVDWIGK NLRFDINKTV SVFETTIRVL GGLLSAHLIA SDYATGMRIP 130 140 150 160 170 180 SYDNQLLDLA EDLARRMLPA FDTPTGIPFG SVNLLYGVDE QESRITSTAG GGTLTLEFGM 190 200 210 220 230 240 LSRLTNDPIF EQVTKNAVRG LWARRSKLNL VGAHINVFTG EWTQKDAGIG TSIDSFYEYL 250 260 270 280 290 300 LKAYLLFGDE EYLFIFQEAY AAAMHYLYND PWYVEVNMDS AAIVWPLFNS LQAFWPGLQV 310 320 330 340 350 360 LAGDIDPAIR THAAFFSVWK RYGFTPEGFN LATLTVQHGQ KSYPLRPELI ESTYWLYKAT 370 380 390 400 410 420 RDPRYLDVGR DMVVSLQYGA RCPCGYCHIV DVEFHKKEDH MESFFLAETV KYLWLLFDLA 430 440 450 460 470 480 SGPDNLVENG PYKYIFSTEG HLLPATPQIS LIHEHCSYLG AYCKGGGIEQ ESRKSDISIH 490 500 510 520 530 540 PQENNASVLS GSWVHSSYPS DSSFLESTST SGLMKGLCPG LTHGQKYGIS YLDATRTAQE 550 560 DHSTHQRENV ADSHSLLVVS QQSAD

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000344 Genomic DNA. Translation: EEE89023.1.
RefSeq	XP_002311656.1. XM_002311620.1.
3D structure databases
ProteinModelPortal	B9HKD6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7467521.
KEGG	pop:POPTR_419089.
Phylogenomic databases
GeneTree	EPGT00050000018377.
OMA	IGTSIDS.
ProtClustDB	CLSN2679415.
Family and domain databases
InterPro	IPR001382. Glyco_hydro_47. [Graphical view]
Gene3D	G3DSA:1.50.10.50. Glyco_hydro_47. 1 hit.
KO	K10085.
PANTHER	PTHR11742. Glyco_hydro_47. 1 hit.
Pfam	PF01532. Glyco_hydro_47. 1 hit. [Graphical view]
PRINTS	PR00747. GLYHDRLASE47.
SUPFAM	SSF48225. Glyco_hydro_47. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9HKD6_POPTR

Accession

Primary (citable) accession number: B9HKD6

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)